Gene Hlac_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1315 
Symbol 
ID7399410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1327987 
End bp1329072 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID643708379 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_002565977 
Protein GI222479740 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.88306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.176233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG AAAGCGACGC ACGAGACGAG CTGATCGACC TGGCGGCCGA CTTCTACGAC 
CAGTTCGCCG ACGGGAAGAT CCCGGAAATG AAGCTTCCCA CGCGGACGAA AAGCAACATC
GAGTACGACA CCGAAAGCGG CGTCTGGACC TACGGCGACC GCACGTCGAC GCGAAGCGCC
AACTCGGTTC GGGGCGCGCG CAAGCTGCTG AAGGCGGCGT ACACGATCGA GTTCCTCGCG
GACCAGCTCG ACGAGGACCG CTCGTCGACC CTGCGGGAGC TGTACTACCT CTCGGAGTCG
TGGGACAACG ACGAGGCGCA GTTCAAGAGT CAGGACGAGT CGAACGACCT CGTGGAGGAC
TTGGAGATCG TCACGGGCGT CACCCGCGAG GACTTCCACA TGCGCCCGGA GGAGTCTGGC
GCGACCCTGA TGGGACCGCT GTTGATCCGC GAACAGACCC GACGCGGGGA GCGCGAGATC
CACTGTCAGG AGGACGTTGG CACGGGCGGC TACCAGATCC CGAACAACCC GGACATGATC
GAGTTCCTCG ACGACGACAT CGACTTCGCG CTCGCCGTCG AGACCGGCGG GATGCGCGAC
CGACTCGTCG AGAACGGGTT CGACGAGGCG TACAACTGCC TCGTCATCCA CCTCAAGGGC
CAGCCGGCGC GGGCGACTCG CCGGATCACG AAGCGCGTCC ACGACGAACT GGACGTTCCG
GTGGCCGTGT TCGCCGACGG TGACCCATGG TCCTACCGGA TCTACGGCTC CGTGGCGTAC
GGCTCGATCA AGTCCGCGCA CCTCTCGAAG TATCTCGCGA CGCCGGAGGC GCAGTTCGTG
GGGATCCAGC CGGAGGACAT CGTCGAGTAC GACCTCCCGG CTGATCCGCT CGCCGACTCC
GACATCAACG CCCTCGAATC GGAGCTGGAG GATCCCCGAT TCCAGACCGA TTACTGGGAA
GAACAGATCG AACTACAGCT CGACATCGGG AAGAAGTCCG AACAGCAGTC GCTCGCGAGT
CGCGGGCTCG ACTTCGTTAC CGACACCTAC CTCCCCGAGC GGCTCGACGC GATGGGCGTG
ATCTGA
 
Protein sequence
MTTESDARDE LIDLAADFYD QFADGKIPEM KLPTRTKSNI EYDTESGVWT YGDRTSTRSA 
NSVRGARKLL KAAYTIEFLA DQLDEDRSST LRELYYLSES WDNDEAQFKS QDESNDLVED
LEIVTGVTRE DFHMRPEESG ATLMGPLLIR EQTRRGEREI HCQEDVGTGG YQIPNNPDMI
EFLDDDIDFA LAVETGGMRD RLVENGFDEA YNCLVIHLKG QPARATRRIT KRVHDELDVP
VAVFADGDPW SYRIYGSVAY GSIKSAHLSK YLATPEAQFV GIQPEDIVEY DLPADPLADS
DINALESELE DPRFQTDYWE EQIELQLDIG KKSEQQSLAS RGLDFVTDTY LPERLDAMGV
I