Gene Hlac_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1245 
Symbol 
ID7399513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1256528 
End bp1256956 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID643708309 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002565907 
Protein GI222479670 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.331226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA AACTGTCCAG CGCCGAACCG AACGAGGGTT CCACGGCGCA ACGCGGGTGC 
TGTGCGGGTG TCGATCACTC GCTGTCCGAC CGCGATCTCG AGGTCGACGT CGAAACCCTC
GCTGCGGTCG GCAGCGAGAC GCGGTACGGG GCGCTCAGAC TCGTCGCCGC GTCCGAGGGC
GGCACCTGCG GCTGCGAGCT GGAGCCGGCG CTCGGCGTGA GTCAGGGAGC AGTCAGTCAG
GCGCTCTCGC GGCTGTACGA CGCCGGGCTC CTCACGCGGC GCAAGGAGGG TCGCTGGCGG
TACTACGACG CGACCGGGCG AGCCGAACGA CTGCTGGCGC TCCTCGACGA GACGCGATCA
GCCGGTGAGA CAGGATCCGC CGACGAGAGG CGATCGACCG ACGAGATCGA AGCGGGGTCG
CAGTCGTGA
 
Protein sequence
MTDKLSSAEP NEGSTAQRGC CAGVDHSLSD RDLEVDVETL AAVGSETRYG ALRLVAASEG 
GTCGCELEPA LGVSQGAVSQ ALSRLYDAGL LTRRKEGRWR YYDATGRAER LLALLDETRS
AGETGSADER RSTDEIEAGS QS