| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1233 |
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| Symbol | |
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| ID | 7399501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1242927 |
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| End bp | 1244582 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643708297 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_002565895 |
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| Protein GI | 222479658 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3356] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000686662 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGCGG ACAACGTCGA CGTCTTCCAG CGGCTGGTGT TCAGCGTGCC GCCGCTCTCG
CGACAGCTCC CCGCGATGGT GATTCTCGCT GTCGCCTACA GCGTCCTCGC GTTCGCCGCC
TTCTCGGCGT TCACGCCGCT GTCCCCGGAG CTGTCGACCC TCCTTCCGAT CGCGGTGCTG
CTCTTCTTGC TCCCTTTCCT GTTCGCCGGG GAGCTGTTCC ACCGCGTTCT CCCGGAGTAT
CCGCGGACGT GGAGCTTCTT TCTGGCGTTG CTCAACCAGT TCGTCCTGTT CGTCCACGCC
TTGGTTCTCT CCGGAGCCAA CGACGTGGGA AACGCGTGGA GCATTGTCTG GCTCCTGTTT
ATCACGATCT ACCTGATCAA CATCCTCGTG CTCGTCGTCT CGACGGGGAT CGACCGCTAC
AAGCGCATCC TCCTCGTCGC GCTCGCGGAG CCGGCGGCGC TGATCGTCGC GTTCTACGCG
TTCGCCGGCG GTGACCTCGG GTTCACGACG TACCGACACG TGTTCGCGTT CGCCTCGCTG
CTCATCGCGG CGGCGTTCCT CGTGTTGGTG CTCGCCATCG TCGACTACCT CATCAGGAGC
AACACCGACG TCTCCGCGTT CGAACTCACC TCCGGAATCC TGCAGAACGA CCGCGCCTCG
CTCGATCTCG GCATCGAGGC TGAACCCGCC GTCGAGACGC TCGCGATCGA CAACGGCGAC
CAGCTGACGC TCGCCGCGCC GTGGGTCCAC CCCGGCCCGC TCGGCGGGTT CGGCGGCGGC
CAGCTGAGCG GGAACGTGAT CGACGCCTTG AACGACGGCG ATGAAGGAGA TAGCGGGTTC
TTCCTCCACG TCCCGTGCAC GCACAAGGAG GACCTCTCGA ACCCGGGCGA CGCCGAGACG
ATCCTCGATG CCGTCGCCGA TCCCGGGCGC GTCGACCGCG CGTCGCGGCT GGTGAGCCAC
GACTACGGAG AGATCGAGTT CCACGGCCGA CGAATCGGCG ACAAGCAGGT GATCTTCCTT
CACGGCGAGG GGATCGACGA CTACGACACG GGCGTGTTCA TGAGCGATGT CGACGAGTCC
GAGGTGCTGC TCGTGGACCT CCACAAACAC GACCTCCAGA ACGGGCCCGA AAAAGAGGTG
CTGTACGGCT CGTCCGAGGC GGATCTGCTG AAACGGCACT TCGACGACTT CCGTGATCTC
CTCGACGACG CGCCGCTTTA CGACTACGCG GCCGGCTTCG CGGTTCGCCG CACTGATCAG
GATGTCGCGG CGATCGTCGA GTCGGTCGAC GGACAGGAGG TCCTGTTAAT GGGGATCGAC
ACCAACGGAA TCACGCCAGA CGTGCGGGAG CTAGCGGCCG ACTACCGCGA GTCGTTCGAT
GAGGTGCTCG TCTTCTCGAC GGACACCCAT GCGTCCATCC ACGAGCTCGC GAACACGACG
CGGTCGGACA CCGAGTCGCT GACCGAGGCG ATCGAACACG CCACCGACGC GGTGGCTCCC
GCGACGATCG GCCTGACCAG CCGGACAACC CGCCCGCTCA AGCTACTGAA AAACGACTAC
AACGGGCTCG TGTTCAGCGT CAACATCCTG ATCCGGTTGA CGGTCATCTC GCTCGCGATG
CTGTACGCGC TGCTCGTCAT CTGGCTGTTC TTCTGA
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| Protein sequence | MGADNVDVFQ RLVFSVPPLS RQLPAMVILA VAYSVLAFAA FSAFTPLSPE LSTLLPIAVL
LFLLPFLFAG ELFHRVLPEY PRTWSFFLAL LNQFVLFVHA LVLSGANDVG NAWSIVWLLF
ITIYLINILV LVVSTGIDRY KRILLVALAE PAALIVAFYA FAGGDLGFTT YRHVFAFASL
LIAAAFLVLV LAIVDYLIRS NTDVSAFELT SGILQNDRAS LDLGIEAEPA VETLAIDNGD
QLTLAAPWVH PGPLGGFGGG QLSGNVIDAL NDGDEGDSGF FLHVPCTHKE DLSNPGDAET
ILDAVADPGR VDRASRLVSH DYGEIEFHGR RIGDKQVIFL HGEGIDDYDT GVFMSDVDES
EVLLVDLHKH DLQNGPEKEV LYGSSEADLL KRHFDDFRDL LDDAPLYDYA AGFAVRRTDQ
DVAAIVESVD GQEVLLMGID TNGITPDVRE LAADYRESFD EVLVFSTDTH ASIHELANTT
RSDTESLTEA IEHATDAVAP ATIGLTSRTT RPLKLLKNDY NGLVFSVNIL IRLTVISLAM
LYALLVIWLF F
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