| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1167 |
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| Symbol | |
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| ID | 7400976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1174037 |
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| End bp | 1174810 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708232 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002565831 |
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| Protein GI | 222479594 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0347926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAACG GGATTCACGT CGAACTTGCC GTCTCGGCCT GTGAGGGCTG TCCCGTGGCC
GCGCTCTCGT CGAGCACCGC GGTCGAAGAG TTCCGCATCG ACGCAGACGA CGCCCGAGTT
GAGTTCGTCG CCCCCGATCC GCCCGAGGAC CCGCCCGGCG GCCTCGATCT CGTCGAGTTC
GCCGGCGAGG CGCACGGTCG CTACGAGATT ACCTGCGAGC GCCCCGCGAC CGACGGCGGC
CTCGCAATCG ACGCGCCGGA GGCCGAAACA GGCGCCGACG CCGGTCCGTC CTCGTCGCCG
GCCGCCGAGC CGTCCCCCCA CGCAACCGCC GACGGCGTCT GCGACAACTG TTCGTGCGGC
GGGCTTCCGT CAGCGTTCGC GAACTTCCCG GTCTCGCCGC GCCGGACCGA GATGGAGGAC
GGGGAACTGC TCGTCTCGTT CGTCCTGACG GGCCACGAGG AGCTGCAGGC CATTGTCGAC
GAGTGCGAGG CCGCCGGGCT CGGCGTAGAG CTGCGCCGGC TGTGCGTCGA TCGCGGGGAC
CGGAGCGCGA CGGATGACTC CTGTCGCGAT GTCGTCCCGG TCGATCTCGC CGGCGTGACG
GACCGACAGG CCGAGGTCGC GGCCGTCGCG GCCGAGAAGG GATATTTCAA CGGTGACGGC
GCCTCCGCCG GAGAGATAGC CGCGGATCTC GACCTCGCGA AGTCCACGGT CTCGGAACAC
CTCCGGACCA TGACGGACAC GCTCTTCTCG CAGGCATTCG GGGACGGTAC TTAA
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| Protein sequence | MTNGIHVELA VSACEGCPVA ALSSSTAVEE FRIDADDARV EFVAPDPPED PPGGLDLVEF
AGEAHGRYEI TCERPATDGG LAIDAPEAET GADAGPSSSP AAEPSPHATA DGVCDNCSCG
GLPSAFANFP VSPRRTEMED GELLVSFVLT GHEELQAIVD ECEAAGLGVE LRRLCVDRGD
RSATDDSCRD VVPVDLAGVT DRQAEVAAVA AEKGYFNGDG ASAGEIAADL DLAKSTVSEH
LRTMTDTLFS QAFGDGT
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