Gene Hlac_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1137 
Symbol 
ID7400946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1143927 
End bp1145237 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content64% 
IMG OID643708202 
Producthypothetical protein 
Protein accessionYP_002565801 
Protein GI222479564 
COG category[R] General function prediction only 
COG ID[COG1913] Predicted Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG GTGCTCGGTC AACAGATTCC AAGCCCACTG GTGTCGATCA AGAGTCCGCT 
GGCAGTGCAA TCACGAATGG CGATGGGGCC GAGCGGCTCG ACCCGCTGAC AGTGGACGAC
CAGCGTGGCG ACGAGGCTGC GCCGCAAATC GACGTCGGGG TTCTCATCGC GCACTCGCCG
GGGACGAACG CCGAGCCACT GCAATCGTTC GCCGAGCAGA TGACCCGCGA TGGCGTCGAT
GAGCTAGCGG CGGCCACGGA CGCGACCTGG CGAGTTCACT GTGCCGAACC GGATCCGCTT
ACCGACGCTG CCCCCCGGCG ACCGTCTGAG TTCCTCGATG AGGCCGCACT TCACATGGTG
AAGCGTCCGT ACGACCTCGT CGTCGTCGTG ACCGACGTGC CACTGACCAC GCGTGAGGAG
CGAACCGTCG AGGGACTCGC GTCCCCGATC GCGCGTGTGG TCGTCGTTTC GACGCGGCGA
CTCCGTCGGA GACCCGGCCG AGAGACGGTC CAAGCACTCG ATTCGGCGGC CGTCCACTGG
AACGCCGCAA CCCTCCTCGT GCATCTCTTC GGACACGTGT TCGGTGCGGA CCACGATGAC
GGCGGCGTGA TGATGCCGTT CTCGTTCGAT CCCTCTCGCC GGAGCGTCCC GCGATTTGAC
GCGGACATCA CGCAACACCT CAGGAAGATC ACCACCCGTA TCCCCGAAGA AGGCGTCTCA
CGTGGGCGGC TTCGACGGCT GGCGTTTCAC GCGCTGAGTC TTGCGCGGAA CCCGTGGACC
GTCGTCTCGA CGCTCCTGCA GAGTCGCGCA CCGCTGCTTC CGTTTTCACT CCCGCGCCTC
TCGACGGCCG CGGTGACGCC GACGCTAATT TTAGTGTTCA GTGCCGAGGC GTGGGACGTC
GGACTGAACC TGACCAACCG GACCACCACG CTGTTCGCCA TCGGGAGTAT CATCGCCGCC
GCTGTCCATC TCTTGTACGT TCAGCGGCTG TCCTTCCCGC GCGAGCGGAG CCAAGTGATC
ACCGAACACA TGGCGCTGGT GAACGTGACG GTGTTCTGTA TTCTCGTCGT GGCGATGATG
GGACTCTTCG TCCTCGTCGG GTCGATCATG CTCCTGATCG AACTCGCCGT CTTCCCGCCG
AACCTGATGA CGAACTGGCC GAGCCTCGAG GAGCCCACTG TCGGGTTCAC CGACCTCATC
CGCGTTGGTG GCTTCATCAG CACGCTGGGT GTGCTGTCGG GGGCACTCGC AGGCGGGATC
GAGAACCGAA TGGCGCTCCG CCATCTCGCA CTCTTTCGTG ACCACCCGTA G
 
Protein sequence
MSDGARSTDS KPTGVDQESA GSAITNGDGA ERLDPLTVDD QRGDEAAPQI DVGVLIAHSP 
GTNAEPLQSF AEQMTRDGVD ELAAATDATW RVHCAEPDPL TDAAPRRPSE FLDEAALHMV
KRPYDLVVVV TDVPLTTREE RTVEGLASPI ARVVVVSTRR LRRRPGRETV QALDSAAVHW
NAATLLVHLF GHVFGADHDD GGVMMPFSFD PSRRSVPRFD ADITQHLRKI TTRIPEEGVS
RGRLRRLAFH ALSLARNPWT VVSTLLQSRA PLLPFSLPRL STAAVTPTLI LVFSAEAWDV
GLNLTNRTTT LFAIGSIIAA AVHLLYVQRL SFPRERSQVI TEHMALVNVT VFCILVVAMM
GLFVLVGSIM LLIELAVFPP NLMTNWPSLE EPTVGFTDLI RVGGFISTLG VLSGALAGGI
ENRMALRHLA LFRDHP