Gene Hlac_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1109 
Symbol 
ID7400918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1115680 
End bp1117053 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content74% 
IMG OID643708174 
Producthypothetical protein 
Protein accessionYP_002565773 
Protein GI222479536 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC GGAGTCCGGG GGGATCCCCC ACCCGCCGAC GGTTACTCGC GGCGGCGGCG 
ACCGCGGGCG CGGGCGCGCT CGCCGGCTGC GGCTACCGTC CCGGCGGCGG CGACCTCGCG
TGGGAGTCGT CGATTCGGAC CAACGGGCTC CTCGGACCCG GAACGACGCG GTTCGCGGTC
ACAGCGGACC GCCTGTTCGC CGTCCGGAAC CAGTCCGGAC GCACGTACGA CTTCGAGACC
GAGACGTGGC GAAACGTGGA GAACGCGACC GTGAGCGCGG TCGACGGGAC GGGGGCGACC
CGACTCGCCG CGGAGACGGA GCGGCAGGCG GTCGCTCCGC CGGCCGTTAC CGAGCGTTCG
GTGTTCGTCC CTGTGGAAGG GGGACGAGCC ACCGCGATCG ACCGCGACGC GGCGGGGATC
GACCCCGACG CGCGGGAGAC GACCGCCGGG ACCGAAGGCG ACGAGACCGA GTCGGGAGAC
GAGATCCGCT GGCAGGTCAA TGTCGTCGTA ACGGGCGAAT CGAGCGAGTC CGACGAGTCA
AGCAAATCGG GCGAGTCGAG CGGGTCGGGC GGGACGGAAG CGCCGCCAGC GGTCGACGGG
ATCCGCGCGG GCGATCGGCT GGTCGCCGCG GTCGCGGGAT CGGAACTGGT CGCCCTCGAC
GCCGAGACGG GCGAACGAGC CTTTAGCGTC ACCGAGGCGT GGCCGGATGG CGGGGACGGC
GCCGCCGACC GCGTCGCGGT CGACGGCGAA GGCGTGTGGG TCGCGGTCGA AAGCGAAGGT
GAGGGCGAAG TCGACGGGGG CTCAGAGGAA CCGGTGGCTA CTCTCGTCCG GTTCGGCCCG
TCCGGTGAGC GCCGCGCGGA GCGGTCGGTC TCAGTGGATG TCGACTGGCT CGTCGCGGTC
GACGAGACGC TCGTCGTCGG GAGCGCCGCG GGGGGAACGG TGAGGGGGTT CGACGCGGAT
CTCGACCGAC GGTTCGCGCT GTCGGTACCG ACGCCGAGCG ATCGTCCGCC GGTCGTCGAA
GTGGCCGACG GGGCTGGCGG GCCCGACGGG AACGGCCCTA CGCGACGGAT CTACCTCCGT
CGGGGCGGAG CGGTCAGGGC GCTCGACACC GGCGACGGAG AGGTCGCGTG GAAGCGGACC
GACGTGCCGA CTCACCGGCG GCCCGCCGTC GACGCCGACG GGCTCTACGC GGTCCGATCG
CGAGCGGTCC TCGCCGTCGG CGCCGACGGC GAAGACCGCT GGCGGGCGCC GCTCCCCGAG
AGCGTCACCG TCGACGAACT GTTCGCGGTC GGGGGTCACG TGATCGTCGT CGACGGCGGG
GAGCTGTACG GGCTCCGCGC GACGCCGGGC GAGCGGTGGT CGCTGGTCGG GTAG
 
Protein sequence
MTERSPGGSP TRRRLLAAAA TAGAGALAGC GYRPGGGDLA WESSIRTNGL LGPGTTRFAV 
TADRLFAVRN QSGRTYDFET ETWRNVENAT VSAVDGTGAT RLAAETERQA VAPPAVTERS
VFVPVEGGRA TAIDRDAAGI DPDARETTAG TEGDETESGD EIRWQVNVVV TGESSESDES
SKSGESSGSG GTEAPPAVDG IRAGDRLVAA VAGSELVALD AETGERAFSV TEAWPDGGDG
AADRVAVDGE GVWVAVESEG EGEVDGGSEE PVATLVRFGP SGERRAERSV SVDVDWLVAV
DETLVVGSAA GGTVRGFDAD LDRRFALSVP TPSDRPPVVE VADGAGGPDG NGPTRRIYLR
RGGAVRALDT GDGEVAWKRT DVPTHRRPAV DADGLYAVRS RAVLAVGADG EDRWRAPLPE
SVTVDELFAV GGHVIVVDGG ELYGLRATPG ERWSLVG