Gene Hlac_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1103 
Symbol 
ID7400912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1108614 
End bp1109141 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID643708169 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002565768 
Protein GI222479531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG CCGACGCGGG CCGCGATATC GACACGACTG AGCCCGGCCG AGCGTGGACG 
TTCGGCGACG ACATCGACAC CGACCAGATC ATCCCGTCGC GGTTCCTCGT CTCCAGCGAT
CCGGCGGAAC TCGGCGAGCA CGCGTTCAAC GACCTCCGCC CGGAGTTCGC TCCGAACGTC
GCCGACGGCG ACTTCGTCGT GGGCGGGCAC AACTTCGGGA GCGGCTCCTC CCGTGAGCAC
GCCCCGCTCT CGCTACTCGG TGCGGGGATC GACGGAATCG TCGCGCAGTC GTTCGCCCGG
ATCTTCTTCC GGAACGGGAT CAACCTCGGG CTCCCCGTGT TGATCTGTCC GGACGCCGAC
CGGATCGACG ACGGCGACGA GATCAGTCTC CGACTCGACG AAGGGGCCGT CATCAACCAC
ACCGCGGACG AGCGGTACGA CGCGGACCCG CTACCCGAAT TCCTGCAGAC ACTCGTCGAT
CGCGGCGGAC TCGAACCGTA TACGCGAGCG AAACTTGGGA CCGAATAA
 
Protein sequence
MTDADAGRDI DTTEPGRAWT FGDDIDTDQI IPSRFLVSSD PAELGEHAFN DLRPEFAPNV 
ADGDFVVGGH NFGSGSSREH APLSLLGAGI DGIVAQSFAR IFFRNGINLG LPVLICPDAD
RIDDGDEISL RLDEGAVINH TADERYDADP LPEFLQTLVD RGGLEPYTRA KLGTE