Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1103 |
Symbol | |
ID | 7400912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1108614 |
End bp | 1109141 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708169 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_002565768 |
Protein GI | 222479531 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG CCGACGCGGG CCGCGATATC GACACGACTG AGCCCGGCCG AGCGTGGACG TTCGGCGACG ACATCGACAC CGACCAGATC ATCCCGTCGC GGTTCCTCGT CTCCAGCGAT CCGGCGGAAC TCGGCGAGCA CGCGTTCAAC GACCTCCGCC CGGAGTTCGC TCCGAACGTC GCCGACGGCG ACTTCGTCGT GGGCGGGCAC AACTTCGGGA GCGGCTCCTC CCGTGAGCAC GCCCCGCTCT CGCTACTCGG TGCGGGGATC GACGGAATCG TCGCGCAGTC GTTCGCCCGG ATCTTCTTCC GGAACGGGAT CAACCTCGGG CTCCCCGTGT TGATCTGTCC GGACGCCGAC CGGATCGACG ACGGCGACGA GATCAGTCTC CGACTCGACG AAGGGGCCGT CATCAACCAC ACCGCGGACG AGCGGTACGA CGCGGACCCG CTACCCGAAT TCCTGCAGAC ACTCGTCGAT CGCGGCGGAC TCGAACCGTA TACGCGAGCG AAACTTGGGA CCGAATAA
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Protein sequence | MTDADAGRDI DTTEPGRAWT FGDDIDTDQI IPSRFLVSSD PAELGEHAFN DLRPEFAPNV ADGDFVVGGH NFGSGSSREH APLSLLGAGI DGIVAQSFAR IFFRNGINLG LPVLICPDAD RIDDGDEISL RLDEGAVINH TADERYDADP LPEFLQTLVD RGGLEPYTRA KLGTE
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