| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0977 |
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| Symbol | |
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| ID | 7401871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 965864 |
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| End bp | 967906 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708043 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002565645 |
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| Protein GI | 222479408 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCG ACACGGGCGT CGGCGACGGC TCCGTCGACG GGAACCTCCT CGCGGAGCTG
TTCTACCCAG TTTTCGAGCT GCTCTTTGAC CCGGACGGCG ACTTCGTCGG CGACATCGAG
CGCAAGCTCG CCGAGGCGCG CATGCCGGAC CAAGTGGAGA TGTACGTCTC TAGAGCGCTG
GGCGTCGGCC TGCTCGTCGG CGGGACCCTC TGGGCGCTCG GAACGCTGAC CGGCTACGGC
GCGTTCTCGC TCGGGCTGAT CGACCCCGAG ACGCTCTCGC TCGGCATGCC CGCGCCGACG
CCGGCGATCA AAGCGTTCCT GCGGTCGCTC GTCGTGCCCA CCGCGGTTCT CGTCAGCGGG
CTCGTGTTCG GGTCGATCGG GTTCGCGATC GGTTTCGGCG GCGTGGTCGC GATCCCCTAC
TCGCGGGCGT CGGCACGGGA ACGCGAGATA AATCTTCTCC TGGCCGACTC GGTGTCGTTC
ATGTACGCGC TGTCGGTCGG GGGGCTCAAT CAGCTGGAGA TCCTGCGCGC GATGGCGACG
GCGGAGGACA CCTACGGCGA GGTGTCTCAG GAGTTTCAGA GCATCGTCAA CGAGACGGAG
TACTTCGGGA CCGACTACCG GAACGCGATC CGACAGCAGT CGATGGAGAC CCCCTCCGAC
GAGCTCTCGC AGTTCCTCGC GGACATGCTC TCTATCGTCA ACTCCGGTGG CAATATGGAG
AGCTTCCTGA AGGACAAAAA GGAAAAGCAC CTTCGCACGT CGAAACAGGA GCGCGAGATG
ACCTTAGAGA CGCTGGAGCT GTTCGGCGAG ATGTACATGA CGCTGTCGCT GTTCCCCCTC
CTTCTCATCA TCATCCTCGT CATCATGGGG ATGATGGGCG AGTCGGACGA CTTCCTGCTG
TACGCGACCG TCTACGCCCT GATCCCGCTG ACTGGGGTCG GTTTCCTTGT GCTCGTCTCT
ACCGTTAAGC AGGACGAGCC GGGCGACGGC TACCTCCGCC CCGACGGCGG CAGCGATCGG
CTCCGGCAGA CGAGCAAAGA GGGGCTGCTC CACTTCGGGC TGATCGAGGC GTTCGTCGGT
CAGTTCGGCG TCTTCGACCG GATCCGCAAC CGCGAGGGGA CGTACAAGAC CAAACAGATA
GTCTCCGCGC CGCACCTGTT CCTCCGGGAC AACCCGCTGT ACACGCTCGC GCTGACTGTG
CCGGCCGCGC TCGTCATCGT CGGCGTCACA GTCATCTCCG GGAACGCACC GACGACCTTC
GACGGCTGGG TGAACCGTCC GGTGTGGGCG ACGTTCGTCT GGGTGTACGT CCCCGCGTAC
CTCGTGCTGG CGCCGCTCGC GGTGTTCCAC GAGTGGAGCC AGCGGTCCAA GCGGGCGATC
ACGGGGAAGC TCTCGGAGAG CCTCCGGAAG CTGTCGTCCG CAAACGACAC CGGGCAGACG
CTGCTCGAAT CGGTGGAAAC GGTGTCGGAG ACCTCCACAG GAAAACTCGC CGAGGAGTTC
GAGGTGGTCC ACGCGAAGGT GAACTACGGG ATGAGCCTGC GGGACGCCTT GGTGGAGTTC
AACAACAAGT ATGCGGTCCC CCGGCTTGCC CGGACGGTGA AGCTCATCTC GGAGGCACAG
GAGGCGTCGT CAGAGATCAC GGACGTGTTG ACCACGGCGG CGCAGGCCTC CGAGAACCAG
GACGACATCG AGCGCAATCG GATCTCCCAG ACCCGAATGC AGGTGGCGAT CATCGTGATG
ACGTACGTCA CCCTGCTGGG CGTGATGGCG ATTCTCCAGA CCCAGTTCAT CGACGTGATG
GGCGATCTCT CCTCGCAGGC GGACGGCGGC GGGGCGTCCG GAGGTGGCGG CGCCGGCTTC
GGAGGTGGTG GCGGCGTCGA CCCCGATGTC CTCTCGATGC TGTTCTTCCA CGCCGTGACG
CTGCAGGCGG TCCTCTCCGG GTTTATCAGC GGCTACATCC GGAACGCCGA CATCGTCTCC
GGCGTCAAGT TCGCCGTGGT CCTGATGACG CTCGCACTGG GGGTGTGGAT ATATGTGGGA
TAA
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| Protein sequence | MSLDTGVGDG SVDGNLLAEL FYPVFELLFD PDGDFVGDIE RKLAEARMPD QVEMYVSRAL
GVGLLVGGTL WALGTLTGYG AFSLGLIDPE TLSLGMPAPT PAIKAFLRSL VVPTAVLVSG
LVFGSIGFAI GFGGVVAIPY SRASAREREI NLLLADSVSF MYALSVGGLN QLEILRAMAT
AEDTYGEVSQ EFQSIVNETE YFGTDYRNAI RQQSMETPSD ELSQFLADML SIVNSGGNME
SFLKDKKEKH LRTSKQEREM TLETLELFGE MYMTLSLFPL LLIIILVIMG MMGESDDFLL
YATVYALIPL TGVGFLVLVS TVKQDEPGDG YLRPDGGSDR LRQTSKEGLL HFGLIEAFVG
QFGVFDRIRN REGTYKTKQI VSAPHLFLRD NPLYTLALTV PAALVIVGVT VISGNAPTTF
DGWVNRPVWA TFVWVYVPAY LVLAPLAVFH EWSQRSKRAI TGKLSESLRK LSSANDTGQT
LLESVETVSE TSTGKLAEEF EVVHAKVNYG MSLRDALVEF NNKYAVPRLA RTVKLISEAQ
EASSEITDVL TTAAQASENQ DDIERNRISQ TRMQVAIIVM TYVTLLGVMA ILQTQFIDVM
GDLSSQADGG GASGGGGAGF GGGGGVDPDV LSMLFFHAVT LQAVLSGFIS GYIRNADIVS
GVKFAVVLMT LALGVWIYVG
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