Gene Hlac_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0960 
Symbol 
ID7401854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp952963 
End bp953685 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID643708026 
ProductRNase P subunit p30 
Protein accessionYP_002565628 
Protein GI222479391 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1603] RNase P/RNase MRP subunit p30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0946359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGG CCGTCCACGC TCACCCCGAC GGCGACGCGA CCGTCGCCCG CCACGCCGCT 
ACCGCCGAGC GGTACGGCTA CGAGGGGATC GTCGTCCGGA CGCGGGAGGC GCTCGATCCG
GCCAGCAAGA GCAGTGAGCA CGCAGACGAG GCGACCGCGC TCCGTGACGA GTACGGGATT
GACGTCGTCG ACGCAGTCGA GATCGACGCT GACAACGCCA CGAGCGCCTC GGGCGCTGTG
GGTAACTACC GATCCGACCG CACGGTTGTC TGCGTCGTCG GCGGCGACGA CGGTCTCAAC
CGATTCGCGG TCGAGGAACC CCGCGTCGAC GTTCTGGTCC GTCCCATGGG CGGCGGCGAC
TTCAACCACG TCCTCGCGAA GGCCGCCCGC GACAACGGAG TCCACGTCGA GTTCGATCTC
GGCCCGCTGT TCCGCGCGAC CGGCGGAAAG CGAGTCCGCG CGCTGGCGGA CCTCCGGAAG
CTCCGCGAGA TCGTGACCTA CTACGACACG CCGCACGTGG TCAGTGCGAA CCCGCGGTCG
CACCTCGACC TCCGCGCGCC GCGCGAGGTC GTCGCCGCCG CCGAGGCGGT CGGGTTCGAC
GCCGAGTGGG TCAGAGAGGG GCTTCGGGCG TGGGGCGAGA TCGCGACCCG CAACCGAGAG
CGCCGCTCCG AGGCCTTCAT AGAGCCGGGG GTCCGACGTG GCAGGTATGA AGAAGACGGT
TGA
 
Protein sequence
MYEAVHAHPD GDATVARHAA TAERYGYEGI VVRTREALDP ASKSSEHADE ATALRDEYGI 
DVVDAVEIDA DNATSASGAV GNYRSDRTVV CVVGGDDGLN RFAVEEPRVD VLVRPMGGGD
FNHVLAKAAR DNGVHVEFDL GPLFRATGGK RVRALADLRK LREIVTYYDT PHVVSANPRS
HLDLRAPREV VAAAEAVGFD AEWVREGLRA WGEIATRNRE RRSEAFIEPG VRRGRYEEDG