Gene Hlac_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0943 
Symbol 
ID7401837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp941981 
End bp942259 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content70% 
IMG OID643708009 
ProductRNAse P, Rpr2/Rpp21 subunit 
Protein accessionYP_002565611 
Protein GI222479374 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2023] RNase P subunit RPR2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.941817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATCC CGTCGGAACG GATCGATCGG CTGTTCGCGC TCGCCCGCGA GGCCGTCGTC 
GACGACGAGT ACGACCGCGC GCGGGAGTAC GTCGCGCTCG CGCGTCGGAT CGCGGAGCGG
AACCGCTGTG GCGTCCCCGC CGAGTTCTCA CGGAAGACCT GTGACGACTG CGACGTCTAC
CTCCGACCGG GAAAGACGGG TCGCGTCCGG CTCCGCCCCG GCCGGGTCGT CGTCCGATGT
CGCGAATGCG GGGCAACCGC GCGGTACCCG TTTGATTGA
 
Protein sequence
MGIPSERIDR LFALAREAVV DDEYDRAREY VALARRIAER NRCGVPAEFS RKTCDDCDVY 
LRPGKTGRVR LRPGRVVVRC RECGATARYP FD