Gene Hlac_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0905 
Symbol 
ID7401276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp896175 
End bp897122 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID643707970 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_002565573 
Protein GI222479336 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.638343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.175019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGC GACGCACGCT TCTCGTCGAC GCGTTCGCGG ACGAGCCGCT GGCCGGGAAC 
GTCGCCGGCG TCGTTCCGGA CGTCGGGGAA CTGAGCGAGG ACCGGATGGG ACGAATCGCT
GCGGAGTTGG GTGCCTCTGA GACCGCATTC CTGCTTGACG CCGGCGAGGG CGCCGACGAG
CGGCTCCGGT ATTTCACTCC CTCAACCGAG GTCGATCTGT GTGGCCACGC CACGATCGCG
ACTTACGGCG CCTTGTTCGC CGAGGGCGCG ATCGACGCCG GCGACCGCAC CCTCCGGACC
AACGTCGGCG ATCTCGAAAT CACGATCGAC GACGACGGAA CCGTCTGGAT GCGTCAGAAC
CCGCCGACGG TCGACGTGAT CGAACCGGAC AGCGGCAGCG ACGGGGACAG CGGAGGCGGC
CTCGACGCGG ACCGACTTGG CGACGCGCTG GGGATCGACC CGGCCGCCCT GCGCGACGTG
GGCGCGGACC TCCCGGTCGC GGTCGCCTCG ACGGGGCTCC CGTGGCTCGT TGTCCCCGTG
AACTTCCTCG AACGGCTCGG TGAGGCTGAA CCGGACATGG CGGCGATCGA GGCAATCACA
GAGGCACACG ACGTGGCCGG CGTGTACGCG TTCACGTTCG ACGCGCTCGA CGCCGAGTCG
ACGCTTCATG GCCGAGCGTT CGCCCCGGCG ATCGGGGTGC CTGAGGACCC CGTGACGGGG
ACCGCGAGCG GCGCGGTCGG GGCCTACCTC CGCGAGGTGG GCGCGTTCGA CGGCGACTTC
CCCGACGAAC TGCGCTTCGA GCAGGGTCAC TTCCTTGACC GACCGGGACA CGTCCGCGTC
CGAGTCGCGG GCGACGTGGT GCGCGTCGGT GGCGAGGCGG TCGTCTCGAT GGACGGCGAG
CTGCGAGTGC CTGCGGACGA CGACAGCGGC GAGATCATCG AGGCGTAG
 
Protein sequence
METRRTLLVD AFADEPLAGN VAGVVPDVGE LSEDRMGRIA AELGASETAF LLDAGEGADE 
RLRYFTPSTE VDLCGHATIA TYGALFAEGA IDAGDRTLRT NVGDLEITID DDGTVWMRQN
PPTVDVIEPD SGSDGDSGGG LDADRLGDAL GIDPAALRDV GADLPVAVAS TGLPWLVVPV
NFLERLGEAE PDMAAIEAIT EAHDVAGVYA FTFDALDAES TLHGRAFAPA IGVPEDPVTG
TASGAVGAYL REVGAFDGDF PDELRFEQGH FLDRPGHVRV RVAGDVVRVG GEAVVSMDGE
LRVPADDDSG EIIEA