Gene Hlac_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0898 
Symbol 
ID7401269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp889755 
End bp890717 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID643707963 
Producthypothetical protein 
Protein accessionYP_002565566 
Protein GI222479329 
COG category[S] Function unknown 
COG ID[COG4083] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.463744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTT CCGGCGTGCC GGCGGTTCTA ACTCTGTTGC CGGACACGTT CACGTTCGCT 
TGGCTCGTCG CGATCCTCTT CGCCGTCGCG TGGCTGCTCG ACAGCCGCGG GCTGGCGGCG
GGTCGCTCGC TCGCGGCCGG CACGTGGGCG CTGTTCGGGC TCTTCTGGCT GACCACGGTG
CCGTACTTCG CGTTCGAGCA CCAGAGCTAC GTCGAGTCGA TCCTCGCGCT CGTCGGGGTT
CCGGCCTGTA TATACGCCGG CTACCTGCTG TACAACGGGC GGGGGTCGCT GTTCACCCTC
ACGCGAGCGA TCGCGATCAT GCTGTTCATC TACCTCCCGT TCGAGACGAT TCCGGCGTTC
ACGCTCGGCG GCATGGCGTT CCCCGAGCCT CGCCGGATCC TCATCGAGGC GGTCGCGACC
CAGACCGGGA TGCTCATCGA CCTACTCGGC TACGTGCCGG AGCGGGTGGC GAGCAGCGAG
GGGTACAACG CGGCCTACCT GTGGACGCTC GACGACGGAC ACACCTACCG GATCGACATC
GTGCTCGCCT GTACAGGACT CGGGAGCATG GCGATCTTCG GCGGGCTCGT CGCGGCGGTC
GAGGCGCCGC TGCGACGGAA GCTCCGCGGG CTCGCGGTGT CGGTCTCGCT CATCTACGTC
CTCAACATCC TCCGGACGAC GTTCATTTCG GTGGTCGCGG GCAACCAGTA CATGCAGTGG
TACCCGGACC TCGTGTTGGC GATGTTCGGC GCGAGCGACC CCTACCGCGT GTCGTTCCTG
ATCTCCGACC GGATCATGAG CCAGCTGCTC GCGGTCGTGG CGCTGATCGG CATCACCTTC
CTCGTCGTGC GAGAGCTGCC GGAGCTCGTG GTCATCCTCG AAGACGTGCT CTACCTGCTC
ACTGGCGAGG AGCACGACTT GACGGAGGCG CTCGAACTCC CACGGGAGCC GACCAACCGC
TGA
 
Protein sequence
MFGSGVPAVL TLLPDTFTFA WLVAILFAVA WLLDSRGLAA GRSLAAGTWA LFGLFWLTTV 
PYFAFEHQSY VESILALVGV PACIYAGYLL YNGRGSLFTL TRAIAIMLFI YLPFETIPAF
TLGGMAFPEP RRILIEAVAT QTGMLIDLLG YVPERVASSE GYNAAYLWTL DDGHTYRIDI
VLACTGLGSM AIFGGLVAAV EAPLRRKLRG LAVSVSLIYV LNILRTTFIS VVAGNQYMQW
YPDLVLAMFG ASDPYRVSFL ISDRIMSQLL AVVALIGITF LVVRELPELV VILEDVLYLL
TGEEHDLTEA LELPREPTNR