Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0898 |
Symbol | |
ID | 7401269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 889755 |
End bp | 890717 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707963 |
Product | hypothetical protein |
Protein accession | YP_002565566 |
Protein GI | 222479329 |
COG category | [S] Function unknown |
COG ID | [COG4083] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.463744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGGTT CCGGCGTGCC GGCGGTTCTA ACTCTGTTGC CGGACACGTT CACGTTCGCT TGGCTCGTCG CGATCCTCTT CGCCGTCGCG TGGCTGCTCG ACAGCCGCGG GCTGGCGGCG GGTCGCTCGC TCGCGGCCGG CACGTGGGCG CTGTTCGGGC TCTTCTGGCT GACCACGGTG CCGTACTTCG CGTTCGAGCA CCAGAGCTAC GTCGAGTCGA TCCTCGCGCT CGTCGGGGTT CCGGCCTGTA TATACGCCGG CTACCTGCTG TACAACGGGC GGGGGTCGCT GTTCACCCTC ACGCGAGCGA TCGCGATCAT GCTGTTCATC TACCTCCCGT TCGAGACGAT TCCGGCGTTC ACGCTCGGCG GCATGGCGTT CCCCGAGCCT CGCCGGATCC TCATCGAGGC GGTCGCGACC CAGACCGGGA TGCTCATCGA CCTACTCGGC TACGTGCCGG AGCGGGTGGC GAGCAGCGAG GGGTACAACG CGGCCTACCT GTGGACGCTC GACGACGGAC ACACCTACCG GATCGACATC GTGCTCGCCT GTACAGGACT CGGGAGCATG GCGATCTTCG GCGGGCTCGT CGCGGCGGTC GAGGCGCCGC TGCGACGGAA GCTCCGCGGG CTCGCGGTGT CGGTCTCGCT CATCTACGTC CTCAACATCC TCCGGACGAC GTTCATTTCG GTGGTCGCGG GCAACCAGTA CATGCAGTGG TACCCGGACC TCGTGTTGGC GATGTTCGGC GCGAGCGACC CCTACCGCGT GTCGTTCCTG ATCTCCGACC GGATCATGAG CCAGCTGCTC GCGGTCGTGG CGCTGATCGG CATCACCTTC CTCGTCGTGC GAGAGCTGCC GGAGCTCGTG GTCATCCTCG AAGACGTGCT CTACCTGCTC ACTGGCGAGG AGCACGACTT GACGGAGGCG CTCGAACTCC CACGGGAGCC GACCAACCGC TGA
|
Protein sequence | MFGSGVPAVL TLLPDTFTFA WLVAILFAVA WLLDSRGLAA GRSLAAGTWA LFGLFWLTTV PYFAFEHQSY VESILALVGV PACIYAGYLL YNGRGSLFTL TRAIAIMLFI YLPFETIPAF TLGGMAFPEP RRILIEAVAT QTGMLIDLLG YVPERVASSE GYNAAYLWTL DDGHTYRIDI VLACTGLGSM AIFGGLVAAV EAPLRRKLRG LAVSVSLIYV LNILRTTFIS VVAGNQYMQW YPDLVLAMFG ASDPYRVSFL ISDRIMSQLL AVVALIGITF LVVRELPELV VILEDVLYLL TGEEHDLTEA LELPREPTNR
|
| |