Gene Hlac_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0893 
Symbol 
ID7401264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp886865 
End bp887251 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID643707958 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002565561 
Protein GI222479324 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.592016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.941817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA TTCCCATCGA GCGGCTGATG TCGACTGAGC TCGTCACGAT CGACCCGGGG 
GCGGCCGCCG CGGACGCGGC GAACCGGATG CTGGAGACGG GAGTGAGTTC TATCCTCGTC
GTCGACGACG ACGGACACCT CGCGGGGCTG ATCACCGCGA CGGACTTCGT CTCGCTCGTC
CGACGGAACG ACCCGGAAGA CGAGACTCCC GTCGAGGCGT TCATGACGAC AGACATTGTC
ACCGTGTCTC CCGACGATTC CGTCGAGGAA CTCGCCGAGC CGACGGACCG AGGGTACACG
CACCTGCCGG TGGTCACCGC GGACAGCAAG CTGGTCGGGA TAGTCTCGAC GACCGATCTC
ACGACGTACG TCTCGGAGCA GCGGTGA
 
Protein sequence
MADIPIERLM STELVTIDPG AAAADAANRM LETGVSSILV VDDDGHLAGL ITATDFVSLV 
RRNDPEDETP VEAFMTTDIV TVSPDDSVEE LAEPTDRGYT HLPVVTADSK LVGIVSTTDL
TTYVSEQR