Gene Hlac_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0889 
Symbol 
ID7401260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp882473 
End bp882901 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID643707954 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002565557 
Protein GI222479320 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.853519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG TATCGACGGA AGAACGGATT CTATCTGTGT TGGAGGAGGA CGCGCAGGCC 
TCCTGTGCGG AGATAGCCGA CCGGGCCGAT GTCTCGAAGC CGACGGTGCG AAAGTACATC
GACCGCCTCG AAGAGAAGGG CGTGATCGTC GGCTACTCCG CGGAGGTCGA CCCGAAGAAG
CTCTCGTCGC AGTCGATCGC GATGGTCGGG ATGGACGTCG ACTCGGGACA GTACGTGGGC
GCGACTCGAA AGCTGAAGGA TCTCGACGAG GTGCAGGCGC TGTACACCTC TTCTGGCGAC
CACATGCTGA TGGCTGAGGT CCGCGCCAGC GACGGTGACG AACTCGGCGA CGTCATCTCA
GAGAAGCTCC TCGGCGTGGA CGGCGTCACC GCGGCGCACC CCTCCTTCCT CCAGGAACGG
TTGAAGTGA
 
Protein sequence
MSTVSTEERI LSVLEEDAQA SCAEIADRAD VSKPTVRKYI DRLEEKGVIV GYSAEVDPKK 
LSSQSIAMVG MDVDSGQYVG ATRKLKDLDE VQALYTSSGD HMLMAEVRAS DGDELGDVIS
EKLLGVDGVT AAHPSFLQER LK