Gene Hlac_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0834 
Symbol 
ID7400800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp828065 
End bp828400 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID643707900 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_002565503 
Protein GI222479266 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.136278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.670884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CGTCCGAGTC GGCGGATGAC GCGGGGGAGG CGCCCGACGG GGGCGACGAC 
GCCGCGGCCG CCGTCGACGC CGAGAAGGTC CGACACGTCG CGGATCTGGC CCGCGTGCGG
CTCGACGACG ACGAGGTCGA GGCGTTCGCC GACCAGTTCG GCGACATTCT CGACTACTTC
GAGGCGCTCG ACGAGGTGCC AGAGACCGAC CGCGAGGAGG AACTCGTCAA CGTGATGCGC
CCCGACGAGG TCAAAGAGGG GCTCACGCAA GAAGAAGCAC TGTCGAACGC CGAGGAGACG
GAAGACGGCT TCTTCGTGGG GCCGAAGGTG TCGTGA
 
Protein sequence
MSDTSESADD AGEAPDGGDD AAAAVDAEKV RHVADLARVR LDDDEVEAFA DQFGDILDYF 
EALDEVPETD REEELVNVMR PDEVKEGLTQ EEALSNAEET EDGFFVGPKV S