Gene Hlac_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0808 
Symbol 
ID7400773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp807816 
End bp808457 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID643707873 
ProductKaiC-like transcriptional regulator 
Protein accessionYP_002565477 
Protein GI222479240 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.105234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.616696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGC TCCCGACCGG AATTTCCGTG CTGGACCGGG AGTTCGGCGG CGGGCTCCCG 
AGCGGCAGTG TCGTCGTGTT GAAGGCAGAC CCCGCGAGCC AGTCGGAGCT AATTGTGGAC
CGGTTCTCCC GTCCACGGGC GTGTCGCTAC CTCACGACGG TGCGTTCGGC TGACGCGGTC
AAGGCGATCC TCACCCTCGG CGGAGAGAGC GAAGGCGACG GTAGTGGAGG CGACGCGGAA
ACCGTCGTCG AGGAGACGGA CCGCGAGGAC CCGATCGATG ACGTGCTGGC GACCGCTTCG
GACCTCCCGG AGGGCGCCAC CCTCGTCGTC GACTCCGTCG AGCCGCTGGA GGCGGCTGAC
CGGTCGCGGT ACGGTTCGTT TCTCACCGAG CTCCGCCGAC ACGTCGATGA TGCCGGCGGG
ATCGCGGTGG TGCACGCTTT CAAAGGGGGA AACGGGCAGA ACCGAGTGGT CACCGAGCAG
GTCGCGGATG TGATCTTCGA CCTCCGAACG ACTGTGACCG GTACGGAGAT CGTGAACCGC
CTGATCGTTC CGAAGTTCCG TGGCGGCGCG GCGCTCGAAG AACCCCTCAA GCTGAAGCTC
ACAGATACAG TGTCGGTGGA CACGAGCCGC GACATCGCCT GA
 
Protein sequence
METLPTGISV LDREFGGGLP SGSVVVLKAD PASQSELIVD RFSRPRACRY LTTVRSADAV 
KAILTLGGES EGDGSGGDAE TVVEETDRED PIDDVLATAS DLPEGATLVV DSVEPLEAAD
RSRYGSFLTE LRRHVDDAGG IAVVHAFKGG NGQNRVVTEQ VADVIFDLRT TVTGTEIVNR
LIVPKFRGGA ALEEPLKLKL TDTVSVDTSR DIA