Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0808 |
Symbol | |
ID | 7400773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 807816 |
End bp | 808457 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707873 |
Product | KaiC-like transcriptional regulator |
Protein accession | YP_002565477 |
Protein GI | 222479240 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.105234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.616696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGACGC TCCCGACCGG AATTTCCGTG CTGGACCGGG AGTTCGGCGG CGGGCTCCCG AGCGGCAGTG TCGTCGTGTT GAAGGCAGAC CCCGCGAGCC AGTCGGAGCT AATTGTGGAC CGGTTCTCCC GTCCACGGGC GTGTCGCTAC CTCACGACGG TGCGTTCGGC TGACGCGGTC AAGGCGATCC TCACCCTCGG CGGAGAGAGC GAAGGCGACG GTAGTGGAGG CGACGCGGAA ACCGTCGTCG AGGAGACGGA CCGCGAGGAC CCGATCGATG ACGTGCTGGC GACCGCTTCG GACCTCCCGG AGGGCGCCAC CCTCGTCGTC GACTCCGTCG AGCCGCTGGA GGCGGCTGAC CGGTCGCGGT ACGGTTCGTT TCTCACCGAG CTCCGCCGAC ACGTCGATGA TGCCGGCGGG ATCGCGGTGG TGCACGCTTT CAAAGGGGGA AACGGGCAGA ACCGAGTGGT CACCGAGCAG GTCGCGGATG TGATCTTCGA CCTCCGAACG ACTGTGACCG GTACGGAGAT CGTGAACCGC CTGATCGTTC CGAAGTTCCG TGGCGGCGCG GCGCTCGAAG AACCCCTCAA GCTGAAGCTC ACAGATACAG TGTCGGTGGA CACGAGCCGC GACATCGCCT GA
|
Protein sequence | METLPTGISV LDREFGGGLP SGSVVVLKAD PASQSELIVD RFSRPRACRY LTTVRSADAV KAILTLGGES EGDGSGGDAE TVVEETDRED PIDDVLATAS DLPEGATLVV DSVEPLEAAD RSRYGSFLTE LRRHVDDAGG IAVVHAFKGG NGQNRVVTEQ VADVIFDLRT TVTGTEIVNR LIVPKFRGGA ALEEPLKLKL TDTVSVDTSR DIA
|
| |