Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0726 |
Symbol | |
ID | 7400199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 741510 |
End bp | 742289 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643707792 |
Product | heat shock protein DnaJ domain protein |
Protein accession | YP_002565398 |
Protein GI | 222479161 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.221225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.743396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGTCG AGCTCATCCG TCTTCTGCCG CCGTGGGTCG TGTTGGGCCT CGCGCTCGGC ATCGTCGCCT CCGGGCTCGT CGCGCTCGCC TTCTACCTCG GGAACCGCTA TGTGGGTCCA GTCCCGAACG ACGGCGCCGG AAGCGCCGGT CCCGCGGGTA CCGCCAGCGG CGCCGGTTCG GGTGCTGCCG GCGACGAGCG ACGACGCCGG GAGATCCGCG AGTACCTGCG GGCGATCGGC GAGCAGTTCA GCGAGGACCA CGCGCTCGAC GGCGTGACGG TCCCCTTCTA CCTCTCCGAG CGCGGGGTCG CCATCACGTT CGACGCGCAC GACTACTTCA GACTGGAGGG AGAGGGCATC TACACCGTTC TCTGTGAACA CGAGATGCCC GGCCGCGGGC TCGGCCGGCG GCTCCCCTTC GACGTGATCG AACCCGAGTG GGCGACGGGC GGCCGGGCCG GGAGGACCAG AAGGACCCAC CGTCGCGTTG GCGGAGCCGG CCGCACCGCC GACAGGATCG GACGAGCCGC CGGCGTGGGT GGACGCGATC CCGTGGCGGC CGCCTTCGCC GAGCTCGATG TGGCGACCGA CGCCGACGCC ACCGAGGTGA AACGCGCCTA CCGCGATCGC GTCAAGGAGA CCCATCCCGA TCAGGGCGGT GACGAGGCGG CGTTCCGACG CGTTCGTGAG GCGTACGCGA CCGCGCGCAA CCACGTCGGC GAGGGAGACG GTGACGTCCC GCGAGACGAC GGCGGCGCTC GTACGAGAGG AGCCAACTGA
|
Protein sequence | MVVELIRLLP PWVVLGLALG IVASGLVALA FYLGNRYVGP VPNDGAGSAG PAGTASGAGS GAAGDERRRR EIREYLRAIG EQFSEDHALD GVTVPFYLSE RGVAITFDAH DYFRLEGEGI YTVLCEHEMP GRGLGRRLPF DVIEPEWATG GRAGRTRRTH RRVGGAGRTA DRIGRAAGVG GRDPVAAAFA ELDVATDADA TEVKRAYRDR VKETHPDQGG DEAAFRRVRE AYATARNHVG EGDGDVPRDD GGARTRGAN
|
| |