Gene Hlac_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0726 
Symbol 
ID7400199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp741510 
End bp742289 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID643707792 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_002565398 
Protein GI222479161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.221225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.743396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTCG AGCTCATCCG TCTTCTGCCG CCGTGGGTCG TGTTGGGCCT CGCGCTCGGC 
ATCGTCGCCT CCGGGCTCGT CGCGCTCGCC TTCTACCTCG GGAACCGCTA TGTGGGTCCA
GTCCCGAACG ACGGCGCCGG AAGCGCCGGT CCCGCGGGTA CCGCCAGCGG CGCCGGTTCG
GGTGCTGCCG GCGACGAGCG ACGACGCCGG GAGATCCGCG AGTACCTGCG GGCGATCGGC
GAGCAGTTCA GCGAGGACCA CGCGCTCGAC GGCGTGACGG TCCCCTTCTA CCTCTCCGAG
CGCGGGGTCG CCATCACGTT CGACGCGCAC GACTACTTCA GACTGGAGGG AGAGGGCATC
TACACCGTTC TCTGTGAACA CGAGATGCCC GGCCGCGGGC TCGGCCGGCG GCTCCCCTTC
GACGTGATCG AACCCGAGTG GGCGACGGGC GGCCGGGCCG GGAGGACCAG AAGGACCCAC
CGTCGCGTTG GCGGAGCCGG CCGCACCGCC GACAGGATCG GACGAGCCGC CGGCGTGGGT
GGACGCGATC CCGTGGCGGC CGCCTTCGCC GAGCTCGATG TGGCGACCGA CGCCGACGCC
ACCGAGGTGA AACGCGCCTA CCGCGATCGC GTCAAGGAGA CCCATCCCGA TCAGGGCGGT
GACGAGGCGG CGTTCCGACG CGTTCGTGAG GCGTACGCGA CCGCGCGCAA CCACGTCGGC
GAGGGAGACG GTGACGTCCC GCGAGACGAC GGCGGCGCTC GTACGAGAGG AGCCAACTGA
 
Protein sequence
MVVELIRLLP PWVVLGLALG IVASGLVALA FYLGNRYVGP VPNDGAGSAG PAGTASGAGS 
GAAGDERRRR EIREYLRAIG EQFSEDHALD GVTVPFYLSE RGVAITFDAH DYFRLEGEGI
YTVLCEHEMP GRGLGRRLPF DVIEPEWATG GRAGRTRRTH RRVGGAGRTA DRIGRAAGVG
GRDPVAAAFA ELDVATDADA TEVKRAYRDR VKETHPDQGG DEAAFRRVRE AYATARNHVG
EGDGDVPRDD GGARTRGAN