Gene Hlac_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0704 
Symbol 
ID7400177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp718685 
End bp719101 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID643707770 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_002565376 
Protein GI222479139 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0871872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT GGATAGCGAT TGGCGCCTTG GCGGTCGTCG GCCTGGTCAT CCCGCTAGCG 
ATGATGTCCG TGTCGGCGTT GCTCCGTCCG AGTGTGCCTG AGACCGGTAA AAGTACCACC
TACGAGTCCG GCGAGACCCC GACAGGCGGG ACGCGGATCC GGTTCAACAT CCAGTACTAC
ATGGTCGCGC TGTTGTTCGT CGTGTTCGAC ATCGAGACCG TGTTACTGTT CCCGTGGGCC
GTCATCTACC GTCCGGCGAT CAGTGCGGGC GTGCCGATGA TCGACCTACT GTGGCCGATG
TTGGCCTTCG TCGGCGTCCT CGCAGTCGGG CTCGTCTGGG CGTGGCGCTC CGGCGCCATC
AGCTGGGCCC GGAGTCCCCG CGCGACCAGT CGAAAGACGG AGCGTGACCT CAACTAA
 
Protein sequence
MSDWIAIGAL AVVGLVIPLA MMSVSALLRP SVPETGKSTT YESGETPTGG TRIRFNIQYY 
MVALLFVVFD IETVLLFPWA VIYRPAISAG VPMIDLLWPM LAFVGVLAVG LVWAWRSGAI
SWARSPRATS RKTERDLN