| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0681 |
|---|
| Symbol | |
|---|
| ID | 7401816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 698231 |
|---|
| End bp | 699391 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707747 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_002565353 |
|---|
| Protein GI | 222479116 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.034617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.293226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA ACTTCTACGA CGTCCTCGGG GTATCGCGGG ACGCCAGCGA GGAGGAGATC
AAGAAGGCGT ACCGCAAGCA GGCCGCCGAA CACCACCCGG ACGTCAGCGA CGACGACGAC
GCCGAGGAGC GGTTCAAGGC GATCCAGAAG GCCAAGGAGG TGCTCACCGA CGAGCAGAAG
CGACAGCAGT ACGACCAGTT GGGTCACGAC CGCTTCACCG AGGCCGACAA GCGCGGCGCG
ACCGGCGGGG GCGGCCCCGG CGGCGCCGGT GGTCCCTTCG GCGGCGCGGG GGGTGCCGGC
GGCGCCGGCG GCTTCGAGGA CATCTTCAAC CAATTCTTCG GCGGTGGCGG CGGCCGCGGC
GGTGGCGGCG GCAACCGACC GCGTCAGGGA CAGGACCTCC GCACCGGGCT CACGATCGAC
TTAGAGGAGG CGTTCGAGGG CGCGACCAAG GAGGTCACAC TCACGCGACC GACCCAATGC
GACACCTGCG ACGGCGCGGG CCACCCGCCC GACGCCGACG TGGAGACCTG TTCGCAGTGT
AACGGGCGCG GACAGGTCCA GCAGGTCCAG CAGACGCCGC TCGGCCGCGT CCAGCAGACC
TCGACGTGTC CCCGGTGTGA AGGATCTGGC GAGCTGTACA GCGAGGACTG CGCCGACTGC
GGCGGCGACG GCGTCGTCCG CGAGGAGGCG ACCCTCTCGG TCGAGATTCC GGCGGGGATC
CGCTCGGGAC AGAGCCTCCG GATGGAACGC GAGGGCGCAC CGGGCGAGAA TGGCGGCCCC
AACGGCGACC TGCTGATCGA GGTCGACGTC GACGTCGGCG ACCGGTTCGA GCGCGACGGC
GACGACCTCC GGGTGAACGA GGCCGTCTCC TTCCCGCAGG CCGTCTTCGG CGACACGATC
GAGGTCGAGA CGGTCGACGG CAGCGTCGAG ATGGACGTGC CGACCGGGAC TCAGAGCGGC
GAGACGTTCC GTCTCAAGGG GAAGGGAATG CCCCGCCTGC GCCGGCGCGG GCGCGGCGAC
CTCTACGTGA AAGTGGGCGT CGTGATTCCC GACTCGCTCA ACGAGGAGCA GCGCGAGGCG
CTGGAGGCGT TCGCCGAGGC CGGCGGCGAA GACGTCGATG TCGGCGGCGG GTTCTTCAAG
AAGCTGAAGA GTTCCTTCTA G
|
|---|
| Protein sequence | MSDNFYDVLG VSRDASEEEI KKAYRKQAAE HHPDVSDDDD AEERFKAIQK AKEVLTDEQK
RQQYDQLGHD RFTEADKRGA TGGGGPGGAG GPFGGAGGAG GAGGFEDIFN QFFGGGGGRG
GGGGNRPRQG QDLRTGLTID LEEAFEGATK EVTLTRPTQC DTCDGAGHPP DADVETCSQC
NGRGQVQQVQ QTPLGRVQQT STCPRCEGSG ELYSEDCADC GGDGVVREEA TLSVEIPAGI
RSGQSLRMER EGAPGENGGP NGDLLIEVDV DVGDRFERDG DDLRVNEAVS FPQAVFGDTI
EVETVDGSVE MDVPTGTQSG ETFRLKGKGM PRLRRRGRGD LYVKVGVVIP DSLNEEQREA
LEAFAEAGGE DVDVGGGFFK KLKSSF
|
|---|
| |