Gene Hlac_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0658 
Symbol 
ID7401793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp674495 
End bp675262 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID643707724 
Producthypothetical protein 
Protein accessionYP_002565330 
Protein GI222479093 
COG category[R] General function prediction only 
COG ID[COG4031] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.129775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.052324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGCC GGCGGTGTGG AACCCCGCTT CGCAAGCCCG GGGACTACTG TCTCACCTGC 
AACACCGCCA ACGCTAACGC CGTCGTCGTC GAGTTCGAGG CAGACCGCGC CCGGCTCACG
ATGCTCGACG AGGACGAGGT CGTCGGCGAG ACGACCGTGA CCACCCGTCC CGAGACCGAC
GAGCAGCTGA CCCAGATCCA GCTCCGCAAC TTCGCCGGGC GCGTCGCCGA CGAGCTCCGC
CGGAAGCGAC CCGACACCGT CTACGCCGCC GGCGCCCGGG AGCCCCTCCG CGAGACGCGC
GCGCAGGTCC ACCACGAGTT CTACCGCGTC CCCGACGCGG GCGTCGACGA GGAGTCCGAC
GGCGATCGCG AGCACGCGAA CCCCGTCGTT TCGTGGGTGC TCGCCCGTCG CGGCGACCGC
GCACTGGATA TCGTCGAGAC GCCACCGCGC GAGAAGATCG GCGGGTCCCA CTCGACGCTC
ATCGGCGATC GCAAGGGGCG GAAGGCGGTC AGCACGGTCG CGCAACATCC GCATGTCAAG
AAGATCGTCC CCGGGCCGAT CGACGCCGGC GGCACCGGCT CACGGACGGG ACTACGTGCG
AAGGCGACGC GCGCCGGGAC CAACGGGAAC ATTCGGCTCC TCCTGCGGGA CGGCTCCAGC
GTGCAGGAGA ATCGGATCGT CACCACCGCG ATGGACCGCG AAACCGGCGA GCGCGTCCGC
GAGGACCTCA ACGAGGCGCT GCGGGACGCG GAACTGCAGG ACGAGTGA
 
Protein sequence
MNCRRCGTPL RKPGDYCLTC NTANANAVVV EFEADRARLT MLDEDEVVGE TTVTTRPETD 
EQLTQIQLRN FAGRVADELR RKRPDTVYAA GAREPLRETR AQVHHEFYRV PDAGVDEESD
GDREHANPVV SWVLARRGDR ALDIVETPPR EKIGGSHSTL IGDRKGRKAV STVAQHPHVK
KIVPGPIDAG GTGSRTGLRA KATRAGTNGN IRLLLRDGSS VQENRIVTTA MDRETGERVR
EDLNEALRDA ELQDE