Gene Hlac_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0657 
Symbol 
ID7401792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand- 
Start bp673784 
End bp674428 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID643707723 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002565329 
Protein GI222479092 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.886666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0828906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGACT ACCTGAAGGC GATCTACGTC CTCCAGTCCG AGCAGGGTCC GCCCGTCTCG 
ACGTCGGCGA TCGCGGAGTA CCTCGACAAG ACCTCGCCGT CGGTCACCGA CATGTTGGGA 
AAACTGGAGG ACCGTGGACT CGTCGAGCGC GAGCCGTACC GCGGCACGGA GCTGACGGCG 
GAGGGCGAGG CGGTCGCTCT AGAGATCGTC CGTCACCACC GGCTGTTGGA GGCGTTTCTC 
GCCGAGCGGC TCGACTACGA CTGGAGCGAA GTCCACGAGG AGGCGGATGC CTTGGAACAC 
CACATCTCCG AGGCGTTCGA GCGGCGCGTG GCGGAGACCC TCGATGACCC CGCCGTCGAT 
CCCCACGGCG ACCCGATCCC GGGCGCGGAC CTCGAACCGG TCGACGAGGA GAGCGGCGCC 
CTCCTCGCGA ACCACAAGGA GGGCGATCGC GTGGTCGTAA CCCGCGTCTC CGACCGAAAC 
GAGGACGAAC TTGAGTACCT CGCCGACGCC GGAATCACGC CGGGCACCGA GATCGAGGTC 
GTCGACGTCG CCCCGTTCGG GATGGTGACT GTGACGACAC CGACCGGCGA GCAGAGCCTC 
CCCGCCGAGA TCGCCCGCTC GATCCGGGTC GAGGACGCGG GCTGA
 
Protein sequence
MEDYLKAIYV LQSEQGPPVS TSAIAEYLDK TSPSVTDMLG KLEDRGLVER EPYRGTELTA 
EGEAVALEIV RHHRLLEAFL AERLDYDWSE VHEEADALEH HISEAFERRV AETLDDPAVD 
PHGDPIPGAD LEPVDEESGA LLANHKEGDR VVVTRVSDRN EDELEYLADA GITPGTEIEV 
VDVAPFGMVT VTTPTGEQSL PAEIARSIRV EDAG