Gene Hlac_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0606 
Symbol 
ID7401742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp625058 
End bp626200 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID643707672 
Productband 7 protein 
Protein accessionYP_002565278 
Protein GI222479041 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.907805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGA TTACCCTCCA ATCCGGCCTC GGGTTCGGCC TGGTGAGCGT CGGGCTGCTC 
TTCCTGCTGC TCGTGGTCAT CACGCTCTGG CAGTCGTTCG AGATCGTCGA CGCCTACGAG
AAAAAGACAC TCACGGTGTT CGGCGAGTAC CGGAAGCTGC TTGAACCCGG GATCAACCTC
ATTCCACCGT TCGTCTCCCG CACCTACGCG TTCGATATGC GGACCCAGAC GCTGGACGTT
CCCCGCCAAG AAGCGATCAC GCGGGACAAC TCGCCGGTGA CGGCGGACGC GGTCGTCTAC
ATCAAGGTGA TGGACGCCAA GAAGGCGTTT CTCGAAGTGG ACGACTACAA GAAGGCCGTC
TCGAATCTCG CGCAGACTAC GCTCCGCGCC GTCCTCGGCG ACATGGAACT CGACGACACG
CTGAACAAGC GCCAAGAGAT CAACGCGAAG ATCCGCAAGG AGCTGGACGA ACCGACCGAC
GAGTGGGGGA TCCGCGTCGA GAGCGTCGAG GTCCGCGAGG TCAACCCCTC GAAGGATGTC
CAGCAGGCGA TGGAGCAGCA GACCTCTGCC GAGCGCCGCC GCCGCGCGAT GATCCTCGAA
GCGCAGGGGG AACGCCGCTC CGCGGTCGAG CAGGCCGAAG GTGACAAACA GTCGAACATC
ATCCGCGCAC AGGGTGAAAA GCAGTCCCAG ATCCTCGAAG CGCAGGGTGA CGCGATCTCG
ACCGTCCTCC GCGCCCGCTC CGCCGAGTCG ATGGGCGAGC GCGCCATCAT CGAGCGCGGG
ATGGAGACCT TAGAGGAGAT CGGGAAGGGC GAATCCACGA CGTTCGTACT CCCGCAGGAG
CTCACCAGCC TCGTCGGTCG CTACGGCAAG GCGCTGTCCG GCTCCGACGT TCAGGAGATG
GAGGGGCTCG ACGGCAAGGA GTTCGACGCC GACACCCGGA AGATGCTCGG GCTCGACGAC
ATCGACGAGA TCCTCGGCCA GATCGAGGAG TCCGCGGAGA TGGACGTCGA GGAGCTAGAA
AAGGAGGCTG AGGCGGTCAA GGCCGGCGGC GCCGGCGCAG ACATCAAGTC GGCCGACGAG
GTCATCCAAG AGATGGACGA AGAGGCCGTC GACGAGGACG TGGAGACCGA GCGCGAGAGC
TGA
 
Protein sequence
MDPITLQSGL GFGLVSVGLL FLLLVVITLW QSFEIVDAYE KKTLTVFGEY RKLLEPGINL 
IPPFVSRTYA FDMRTQTLDV PRQEAITRDN SPVTADAVVY IKVMDAKKAF LEVDDYKKAV
SNLAQTTLRA VLGDMELDDT LNKRQEINAK IRKELDEPTD EWGIRVESVE VREVNPSKDV
QQAMEQQTSA ERRRRAMILE AQGERRSAVE QAEGDKQSNI IRAQGEKQSQ ILEAQGDAIS
TVLRARSAES MGERAIIERG METLEEIGKG ESTTFVLPQE LTSLVGRYGK ALSGSDVQEM
EGLDGKEFDA DTRKMLGLDD IDEILGQIEE SAEMDVEELE KEAEAVKAGG AGADIKSADE
VIQEMDEEAV DEDVETERES