| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0560 |
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| Symbol | |
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| ID | 7401695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 582241 |
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| End bp | 582858 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707625 |
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| Product | protein of unknown function DUF107 |
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| Protein accession | YP_002565232 |
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| Protein GI | 222478995 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCC TCGTGCAGTC CGGACTCCTC TCTCCGGACA CACTCCCCCT GCTGTTGTTG
ACGGCCGGGC TGTTGCTCTC GATGGCGGAG GCGCTCGCGC CGGGTGCGAA CTTCATCGTG
GTCGGGATCG CACTGATCGG GGCGGGGCTC GGCGGCCTCC TCCTCACGTC GCTCGGGGTT
GCCGGTGCCG GACTGACCCT CGTCATGGCG GTCCTGACGC TCCTCTTCGG CGCGGCGGCC
TTCTACGGCT ACCACGAGTT CGATCTGTAC GGCGGGAAAG GCCAACAGCA GACGAGCGAC
AGCGACGCGC TGAAGGGGAA GACCGGCACC GTCACCGAGG AGGTGACCAC CGCCGGCGGC
GAGGTGAAGC TCTCCGGCGG CGGCTTCAAC CCCTACTACG CCGCGCGCTC GATCGAGGGG
ACGATCGAGG AGGGCGAAGA GGTGATGGTC GTCGACCCCG GCGGCGGCAA CGTCGTCACC
GTGGAGTCGA TGGGGTACGT CGAGGACGAC ATCGACAAGG AGCTCGCCGC GGACAGGGCG
CGGAAGGAAG CGCAGCGAGC GGCCGATGCG AGCGTGGACG ACGAGCGAGA GCCCGAGACT
GAGACCGAAC GGGAGTGA
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| Protein sequence | MDVLVQSGLL SPDTLPLLLL TAGLLLSMAE ALAPGANFIV VGIALIGAGL GGLLLTSLGV
AGAGLTLVMA VLTLLFGAAA FYGYHEFDLY GGKGQQQTSD SDALKGKTGT VTEEVTTAGG
EVKLSGGGFN PYYAARSIEG TIEEGEEVMV VDPGGGNVVT VESMGYVEDD IDKELAADRA
RKEAQRAADA SVDDEREPET ETERE
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