Gene Hlac_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0529 
Symbol 
ID7400410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp551843 
End bp552649 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID643707594 
ProductMethyltransferase type 11 
Protein accessionYP_002565201 
Protein GI222478964 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.636084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGTT TCTCTGCGGA GTACCTCGAA CACACCCGTC GCGGGATGTG GACCGACGGT 
CGTCAGGCCC TCGCAGACCT CGACTTGGCG GGCCGCCGCC GCATCCTCGA TGTCGGCTGC
GGCACCGGGG AGCTGACTCG CGTCATCGAC GCGGAGACGC CATCCGACAC GACCGTGATC
GGCGTCGACG CGGACCCGAA GCTTCTGAGA GTCGCCCGCG AGGAGACCGG GCTCCCGTAC
GTCGCCGGCG ACGCGATACG ACTTCCCCTT CCGGACGGGG CCGTCGACCT CGCGGTCTGT
CAGGCTCTCC TCATCAACCT TCCCGATCCA GCCGCCGCGG TGCGCGAGTT CGCTCGGGTC
TCCTCGGAGC TGGTCGCCGC GATCGAGCCT GACAACGCCG ACGTGACGGT CACCTCCACC
GTCGACGCAG AAGAGCGCCT AGAGCGGGAA GCCCGGGAGG CGTACCTACA CGGGGTCGAT
ACCGACGTGG CCCTCGGCGA CCGCGTCCGC GAGGCGTTCA CGGCAACAGG ACTCACCGAC
ATCCGGACTC GACGGTACGT CCACGAGAAG CGAATCGCGG CGCCGTACGC GGAGCCGGCG
CTGACCGCCG CGGCGCGGAA GGCCTCGGGC GCGGGGCTGG CCGACCACCG CGAGGAGCTT
ATCGCGGCGA CCTCCGAGAC CGCATACGAC GACCTCCGGC GGCGCTGGCG AGAGATGGGG
AGAGCGGTAA TCGACGAGAT GGAGTCGGGG ACGTACGAGC GCGTCGAGCG CGTTCCCTTC
GACGTGACCG TGGGACGGAC CGACTGA
 
Protein sequence
MRRFSAEYLE HTRRGMWTDG RQALADLDLA GRRRILDVGC GTGELTRVID AETPSDTTVI 
GVDADPKLLR VAREETGLPY VAGDAIRLPL PDGAVDLAVC QALLINLPDP AAAVREFARV
SSELVAAIEP DNADVTVTST VDAEERLERE AREAYLHGVD TDVALGDRVR EAFTATGLTD
IRTRRYVHEK RIAAPYAEPA LTAAARKASG AGLADHREEL IAATSETAYD DLRRRWREMG
RAVIDEMESG TYERVERVPF DVTVGRTD