Gene Hlac_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0524 
Symbol 
ID7400405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp545534 
End bp545713 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content61% 
IMG OID643707589 
Productputative transcriptional regulator, CopG family 
Protein accessionYP_002565196 
Protein GI222478959 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.221557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.567376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTG TGACACTACG AATACCGAAA CAGCAGATAG ACGAGGTCGA ACAGATGGTC 
GAGACGGGCG AGTTCCCGAA CCGGAGCGAG GCGATCCGGT CGGCTGTCCG CGACATGTTG
AACGAACAGG ACGGCGAGCG CGACGAGCGC AGCCGCAACC GCAACTGGGC GAAGGTGTAA
 
Protein sequence
MERVTLRIPK QQIDEVEQMV ETGEFPNRSE AIRSAVRDML NEQDGERDER SRNRNWAKV