Gene Hlac_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0500 
Symbol 
ID7400381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp518468 
End bp519181 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID643707565 
Productcobalt transport protein 
Protein accessionYP_002565172 
Protein GI222478935 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.455988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCT CGTACGTCCC TGACGACTCG CTCGCCCATC GGCTTGACCC CCGGTCGAAG 
CTCCTCGTGC AGGTCGGGTT CGCGGCGGCG GCGTACACGT ACACGACGCC CCGCGGGCTC
GCCGCGCTCA CCCTTCTCGC CGTCGTCTGC CTTCGCCTCG CCGGTGGCGG CCCCCGCGAC
CTGTGGACGT ACCGGGTCGC GTTCCCGGTA CTTCTGGTCG CCCCCCTCGT CGCCGGCGCG
ACGCTCGGGA CGCCGTGGTT TCGGGTTGAC CGCGCCGCAA CCACGGGGCT CGCGAGCTAC
CGCGTCCTGC TGATCCTCGT CGTCGCCGCC GGCTACGTCA GGTCGACGCC GGTCCGGGAC
TCGCGAGCGG CGATCCAGCG TTCGGTCCCG GGAAAGCCCG GCCAGTTCCT CGGAACCGGC
GTCGCGCTCG TGTTCCGGTT CCTCCCGCTG TTGAAGCGGG ACTTGCTGAC GGCCCGTGAG
GCGGTTCGGG CGCGCGGTGG CGGGGCGCTC CCGGTCCGCG ATCGCATGCG GCTCGTCGCC
GTCGCGGGGA TCAACCGGGC GTTCGGGCGG GCAGATCGGT TGGGGACCGC GCTGAACGCC
CGATGTTTCG CGTGGAATCC GACGCTCCCG CGACTCGCGC TCGGTCCCGC GGACTACCCG
GCGCTCGCGG TCGGCGGGGG GTTGGTGGTG GCGGCCGTGG CGAGCGTGGT GTAG
 
Protein sequence
MTLSYVPDDS LAHRLDPRSK LLVQVGFAAA AYTYTTPRGL AALTLLAVVC LRLAGGGPRD 
LWTYRVAFPV LLVAPLVAGA TLGTPWFRVD RAATTGLASY RVLLILVVAA GYVRSTPVRD
SRAAIQRSVP GKPGQFLGTG VALVFRFLPL LKRDLLTARE AVRARGGGAL PVRDRMRLVA
VAGINRAFGR ADRLGTALNA RCFAWNPTLP RLALGPADYP ALAVGGGLVV AAVASVV