| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0493 |
|---|
| Symbol | |
|---|
| ID | 7400374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 511592 |
|---|
| End bp | 512089 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707558 |
|---|
| Product | fla cluster protein FlaD |
|---|
| Protein accession | YP_002565165 |
|---|
| Protein GI | 222478928 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3351] Putative archaeal flagellar protein D/E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.990936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA ATCCACGGCA ATACGACGTA CGAGAGCTGC GCCAGATCGC GGACGCACCG
CGGGACGGCG CCGACGAAGC GCCTCGGGAG CGGTCGCTTC GTCAGCCGAA CCGGAGCCGG
GCGGAGCAAG CCGCCCGGTC GGCCGCGTTC ACCGAGCTTC TCCAGCGTCA GCGAGGGCTG
CGGCTGTCCG GCGACGAGAG CCAATCCGAC GCCGGCGATC GACCATACCT GACGGCGATC
CCGGCCTCGC CGGAAGCGGA ACACGAGATC GGCGAGTGGC TCGGCTACCT CGTCGACGTC
GGCGGCCACG TGCGGAGCCG GGACGCGCTG TCGTACTACG CCGAGCTCGG CTGGGTCGAC
GACGACGCAG TCGAGGCCCT CCGGCGTCGG CTGGAGGGGT TCGACGCCCC GCGGTACGAC
CGGCCCTTTA CCCCCGCGGA CCATCGGATC AGCCTCGTCT CCATCGTCCG GATCGCTTCG
TGTGCGAGTC AATCATGA
|
|---|
| Protein sequence | MSLNPRQYDV RELRQIADAP RDGADEAPRE RSLRQPNRSR AEQAARSAAF TELLQRQRGL
RLSGDESQSD AGDRPYLTAI PASPEAEHEI GEWLGYLVDV GGHVRSRDAL SYYAELGWVD
DDAVEALRRR LEGFDAPRYD RPFTPADHRI SLVSIVRIAS CASQS
|
|---|
| |