Gene Hlac_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0479 
Symbol 
ID7400359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp497565 
End bp498470 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID643707543 
Producthypothetical protein 
Protein accessionYP_002565151 
Protein GI222478914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.869927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.129695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCT CTCCGAACGC ACGGAGCGAC GGGACCACGG CGAAACGGGA CGCCGACGGC 
TCCGGCTTTC GCCGCGAGTT GGTCGCGGGG GTCCGACTCG TCGACCTGCT CGCGCTCGCG
GCGGTGCCCG TGGTTCTCGG CGCCGTTTTC GCGCTGCCAG AATCAACCCG GCGGTCGCTC
GCGTTCGCGT ACACCGATCC GACGGTGCGG ACCGCCTTCA CCGCCCACTA CGTCCACCTC
GATGTCGATC ACCTCGCCGG CAACGTAGCG GGGTACGTCG TCCTCGCCGG TGTCGGGTAC
GCGCTCGCGG TGTTGGCGGG GTGTCGGCGG TTCTTCATGG TCGCGCTCGC GACGTTCCTC
GCCGCCTTTC CCGTCGTGTT GTCGGCACTG AACCTCGCCG TCCCGCGGAA CGCGATCAGC
TTTGGATTCT CCGGGATCAA CATGGCGTTC GCCGGCCTGC TCCCGCTTCT ACTGGGAGTC
TACGCCCGCG AACGGTTCTT TCCGGAGGCG TCGATACGCG CGCTCCCCGC GGTCTTCTTC
CCGCTCGTCG GCTGGATGGC GTTTCTGGCG CTGCCGGTCT CGCCCGGGAG TCTCGACGAA
CCCGGACTCG CTGGACTCGC GACCGCGGTT GCGGGGATCC TGCTCGGTCT GCTGTACGCG
TCGAGCACCG GGGTCCGGAT CCGACGGGCG CTCCGAGACG GGGTTCGGGC GGCGATCTCG
AACCCCGGCT ACGGCGACCT GTTCGCCATC GGCGTCGCTC TGGTCGTCGG CTACCCGGTT
GTCGGGTTCC CCGGCGATCC GACGGGACCC GACAGCGTAG TAAATCTGTA CGTTCACCTG
CTTGGGTTCT GTCTCGCGTT CATCGGGCCC TTCATCCTGC TCGCGGCCGG GACGTTCGAG
GAGTGA
 
Protein sequence
MTASPNARSD GTTAKRDADG SGFRRELVAG VRLVDLLALA AVPVVLGAVF ALPESTRRSL 
AFAYTDPTVR TAFTAHYVHL DVDHLAGNVA GYVVLAGVGY ALAVLAGCRR FFMVALATFL
AAFPVVLSAL NLAVPRNAIS FGFSGINMAF AGLLPLLLGV YARERFFPEA SIRALPAVFF
PLVGWMAFLA LPVSPGSLDE PGLAGLATAV AGILLGLLYA SSTGVRIRRA LRDGVRAAIS
NPGYGDLFAI GVALVVGYPV VGFPGDPTGP DSVVNLYVHL LGFCLAFIGP FILLAAGTFE
E