| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0452 |
|---|
| Symbol | |
|---|
| ID | 7401070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 469344 |
|---|
| End bp | 470267 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643707516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002565124 |
|---|
| Protein GI | 222478887 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1340] Uncharacterized archaeal coiled-coil protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0103464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.401357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACGA AAGAAGAAGT CATCGAACAG TACGATATCG AGGCGATGGA CGAGGCGGAC
AACGTGGACC TTTCTGAGGA CGATCTTGAG AACGGATCGA AGGGTCAGCT CATTAAACGC
GCCGGGCAGC TGCGCGACCG ACGGAACGAG CTGAACCAGA TGGCCTCCGA GCGCGCATCC
AACCGCGACG ACCTCAACGC GAAGACCCGC GAGAAGGTCG ATGAGGCCCA AGAACACCGC
GAGAAGCGCG ACGAGCTCAA CGAGCAGGTC CAAGAGCACA AGGACAAGCG GAACGAGCTC
AACGCCGATG CCAACGAGCT GTTCGACGAG GTTGAGGAGC TCAAACAGGA CATGGAGCTC
GGCTCCGGCA AGTCCATCGA GGAGCTCAAA GAGGAGATCG AGGACCTGGA GTTCCGTCAG
CAGACGGAGG TCCTCGACGC CGAGGACGAG CGTGAGCTTA TCGAGAAGAT CGACGAGAAG
CGAGAGAAGC TCGCCGAGAA GAAGGAGAAA GTCGACGACA CCAGCGAGCT CGACGAGCTC
GTCGAGGAGG CCGAGGAGGT CCGCTCCGAG GCGTCCCAGC ACCACCAGAA GGTGACGGAG
CTCGCCGACA AGGCTCAGGA GCACCACAAC CAGATGATCG AGGCCTACCG CGAGGCCGAC
GACATCCGCG ACGAGGCCGA CGAGATGCAC GAGCTGTTCG TCGAGGCCCA GGAGGCCGCC
GACCAGCATC ACGAGGACTT CGTTCGCGTT CAGAAGCGCC TGCGCGAGCT CGACAAGGAG
GAAGAGAAGG AGCGCAAGGA CGAGCGCGCC GAGAAGCGCG AGGAAGAGAA GGAAGAGGCC
GAGGAGATCT ATCAGAAGTT CAAGGAGGGC GAGACGCTCG ACACCGAGGA CCTGATGAAG
CTCCAGAAGA CCGGTCTGCT GTAG
|
|---|
| Protein sequence | MVTKEEVIEQ YDIEAMDEAD NVDLSEDDLE NGSKGQLIKR AGQLRDRRNE LNQMASERAS
NRDDLNAKTR EKVDEAQEHR EKRDELNEQV QEHKDKRNEL NADANELFDE VEELKQDMEL
GSGKSIEELK EEIEDLEFRQ QTEVLDAEDE RELIEKIDEK REKLAEKKEK VDDTSELDEL
VEEAEEVRSE ASQHHQKVTE LADKAQEHHN QMIEAYREAD DIRDEADEMH ELFVEAQEAA
DQHHEDFVRV QKRLRELDKE EEKERKDERA EKREEEKEEA EEIYQKFKEG ETLDTEDLMK
LQKTGLL
|
|---|
| |