| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0320 |
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| Symbol | |
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| ID | 7399710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 343310 |
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| End bp | 343945 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643707382 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002564994 |
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| Protein GI | 222478757 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.495226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0608839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCCG GAATTAGGGC GGAGGTCTCG CTCCCGACGG CGTCGCCGTC CCCGTTCGAC
GGCGTGGTCG ACGGGTCGAC GCCGATCTAC AGCGTCGCGC GTAGCTCGTC GAACGGCGAT
CCGGAGACGG TCGTCCTCGA GTTCATCGCC GATGCGGACC TCCCGGTCTC CGAAGGGGTC
GAGGTCGTGT TCGACTACGG CGCTAAGGCG GCCTATCGCT TCAAGGTACC CCGCGTCGAG
GCGTCGCCGT TCGCGATACT CGATCGCCAC AGCGTCCCCG TCTCGGAGAC CACGATCCGG
GACGGACGAC TGGTCGTCAC CTTCCACGCG ACCGACCTGC CGACGCTCCG TTCCGTGCTC
GACGAGTTTC GGGAGTCCTG CTCCGACATG CAGGTGTTGC GGCTCCTCCA GTCGTCGTCG
ACGCCCGAGG AGTCGGACTT GGTCACTGTC GACCGAAGCG AACTGACCGA GCGCCAGCGC
GAGGTGCTCA CCGCCGCCTA CGACGCCGGC TACTTCGACC ACCCGAAGGG GGCCAACGCC
GGCGAGGTCG CCGAATCACT CGGTATCGAC CGGTCGACGT TTTCGGAGCA TATGGCGGCC
GCACAGCGAA AACTCCTCTC GGCACTGCTC GACTAA
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| Protein sequence | MGSGIRAEVS LPTASPSPFD GVVDGSTPIY SVARSSSNGD PETVVLEFIA DADLPVSEGV
EVVFDYGAKA AYRFKVPRVE ASPFAILDRH SVPVSETTIR DGRLVVTFHA TDLPTLRSVL
DEFRESCSDM QVLRLLQSSS TPEESDLVTV DRSELTERQR EVLTAAYDAG YFDHPKGANA
GEVAESLGID RSTFSEHMAA AQRKLLSALL D
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