Gene Hlac_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0278 
Symbol 
ID7401204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp301707 
End bp302285 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID643707341 
ProductV-type ATP synthase subunit E 
Protein accessionYP_002564953 
Protein GI222478716 
COG category[C] Energy production and conversion 
COG ID[COG1390] Archaeal/vacuolar-type H+-ATPase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.591531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGG ACACTGTCGT TGAGGACGTT CGAGACGAAG CCCGCGCGCG TGCAGAGGAT 
ATCCGCGAGG CGGCGGAGTC CGAGGCGGAC GAGATCGTCG CTGAGGCGGA GGCCGATGCC
GAGCGCATCC GCGAAGAGCG GCTCGCCGAG GTCGATCGCC AGATCGATCA GGAGCGCGAG
CAGACGCTCT CCTCGGCCAA ACTCGAGGCC AAACAAGAGC GGCTCGGCGC CCGTCGAGAC
GTCCTCGAAG ACGTCTACGA CGATGTCGAG GCGGCCATCG AGGGGCTCGA CGGCGACCGA
CGCCGCGAGC TGACCGAGAC GCTGCTCGAC GCCACCCTCG CGGAGTTCGA CGACGACGAA
GATGTCGCCG TCTACACCCA TACAGAGGAC GTCGATCTCG TCGAGGAACT CGTCGAGGAC
CGCAACGCCG TGGTCGACGG AGAAATCGAC TGCCTCGGCG GGGTCGTCGC GGAGAGCGAC
ACCTCTCGCG TTCGCGTGAA CAACACGTTC GACTCGATCC TGGAGTCCGT CTGGGACGAC
GAGTTGAAGA ACATCTCGGA GCGACTGTTC GACCAATGA
 
Protein sequence
MSLDTVVEDV RDEARARAED IREAAESEAD EIVAEAEADA ERIREERLAE VDRQIDQERE 
QTLSSAKLEA KQERLGARRD VLEDVYDDVE AAIEGLDGDR RRELTETLLD ATLAEFDDDE
DVAVYTHTED VDLVEELVED RNAVVDGEID CLGGVVAESD TSRVRVNNTF DSILESVWDD
ELKNISERLF DQ