Gene Hlac_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0236 
Symbol 
ID7401162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp254899 
End bp255645 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID643707299 
Productprotein of unknown function DUF105 
Protein accessionYP_002564911 
Protein GI222478674 
COG category[S] Function unknown 
COG ID[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.926355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.451743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGG CGGCCGTGCG CGATGGCGTG CTCCGCCTGC GCCGACCCGA GACGCGCTGG 
CTCTCCACCG GCTGGAACGG GGGCCGGTTG CGGGCCGACG CCGCCTACAA CGTCTCGGTG
CCGGAGGGGT TCGACCGGAC CGACCTCGGC GCGTACCGCG ACGAGCGGCT GGCGCGGGCG
GGGTTTAAAA GTGAAGAGGA CCCGCCAACC CTGTTCACCG GCGTTTCGAT GGTCCACGCG
TACGGCGCAC GTCTCGGATC GGTCGTCGCG TACGCGACCG TCGGGCTGTC GAACCCGGCG
ATGTTGCCGA TGGATCCGAC GGGAGTGACA GGAGCGACGG ACGATGCTGG CGACTCGGAG
CCCGGCGCCG CGGCGTCGAC CGGGGAACCG CCCCGGCGAC CCGGTACGGT CAACCTGGTA
GTCGGAACGA CGCGGCGGCT CGCCGACGGC GCGGCGGCGA ACCTCGTCGC GGTCGCGGCC
GAGGCGAAGG CCGCGACGTT GCTCGCGACG GCGGGCGTGC CGGGGACGAC GAGCGACGCG
GTGGTCGTCG GCGACGACCC GACCGGGGAG CCGGCGGCCT TCTCGGGCAG CGCCACTCCG
GTCGGCGCGG CGGCCCGCGT CTGCGTCCGG GACGCGGTCC GCGCGAGCCT GCGGTCGCGG
TACCCGGACG GCGACCTGCC CGGTCCGGCC GCCGACGCCG AGCACGGCGT CGTCGCCGAC
GAACGAGCGG AGGTTTTCGA GCTATGA
 
Protein sequence
MFEAAVRDGV LRLRRPETRW LSTGWNGGRL RADAAYNVSV PEGFDRTDLG AYRDERLARA 
GFKSEEDPPT LFTGVSMVHA YGARLGSVVA YATVGLSNPA MLPMDPTGVT GATDDAGDSE
PGAAASTGEP PRRPGTVNLV VGTTRRLADG AAANLVAVAA EAKAATLLAT AGVPGTTSDA
VVVGDDPTGE PAAFSGSATP VGAAARVCVR DAVRASLRSR YPDGDLPGPA ADAEHGVVAD
ERAEVFEL