Gene Hlac_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0176 
Symbol 
ID7402105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp189722 
End bp190639 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID643707239 
ProductFeS assembly ATPase SufC 
Protein accessionYP_002564851 
Protein GI222478614 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTC TCGAAATCAA CGATCTTCAT GCGCGGGTGG CGGAAGAGGA CGGCGAACGC 
ATTCTTCGTG GGGTCGACCT AACCGTCGAG TCCGGGGACA TCCACGCACT GATGGGTCCG
AACGGCTCTG GGAAGTCGAC GCTCGCGAAG GTCATCGCCG GCCATCCTGC GTACGAGGTC
ACTGGCGGCG AGATCCTCCT GCATCTCGAC GAGGAGGACG TCGCCGACAT CGACGCCGAA
CTCGACGACG AGGATTACCA CTGGAAGCTG CTGGAACTCG AACCCAACGA GCGCGCAGCG
CTCGGTATTT TCCTCGGGTT CCAGTACCCG GCGGAGATCG AGGGTGTCAC GATGACGAAC
TTCCTCCGGC AGGCGCTCAA CGCCAAGGCG GACGAGCGCG AGGAGCTGTT CGAAGACGAA
GAGGCGGAAG CCGACGCGGA CGAGGACGAC GAGGGGTACG ACACCTCCCC GATGGAGGGT
CCCGCGGACG ACGGCGAGAT CGGCGTCGCC GAGTTCCAGC AGATCCTCTC GGAGAAGATG
GAGCTACTCG ACATGGACGA GAAGTTCATG CAGCGGTACC TCAACGCGGG CTTCTCCGGC
GGCGAGAAGA AGCAGAACGA AGTGCTGCAG GCCGCGATGT TAGAGCCCGC CGTCGCCGTG
CTCGACGAGA TCGACTCCGG GCTGGACATC GACCGGTTGC AGGATGTCTC GAAGGGGATC
AACGCGCTCC GCGACGAGCA GGGCACGGGC GTTCTCCAGA TCACGCACTA CCAGCGGATT
CTCGACTACG TCGAGCCCGA CCACGTTCAC GTTATGTTAG ACGGCGAGGT CGTCAAAAGC
GGCGGTGCGG AACTCGCCGA GAAGCTCGAG GACAAGGGGT ACGACTGGGT CCGCGAGGAC
GCGTTCGAGG CCGCGTAA
 
Protein sequence
MATLEINDLH ARVAEEDGER ILRGVDLTVE SGDIHALMGP NGSGKSTLAK VIAGHPAYEV 
TGGEILLHLD EEDVADIDAE LDDEDYHWKL LELEPNERAA LGIFLGFQYP AEIEGVTMTN
FLRQALNAKA DEREELFEDE EAEADADEDD EGYDTSPMEG PADDGEIGVA EFQQILSEKM
ELLDMDEKFM QRYLNAGFSG GEKKQNEVLQ AAMLEPAVAV LDEIDSGLDI DRLQDVSKGI
NALRDEQGTG VLQITHYQRI LDYVEPDHVH VMLDGEVVKS GGAELAEKLE DKGYDWVRED
AFEAA