Gene Hlac_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0124 
Symbol 
ID7401645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp131279 
End bp132631 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID643707188 
Producthypothetical protein 
Protein accessionYP_002564800 
Protein GI222478563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.263476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ATACAATCGG ACTCTCGCGG CGCAAGATGC TGGTCGGACT CGGTGCGGTC 
GGTGTCGCCT CCGCGGGCGC AGGACTGGGA ACGACGGCGT ACTTCAACGA CACCGAGTCG
TTCGATGACA ACACGCTGAC GGCCGGCGAA CTGGACCTGT TCGTCCACGT CGACTACTCC
GAAGACCAGG GCAGCTACGC GCAGTACTCC ACCCCTGACG GGACCTTCAT CGACGGCAAC
GTCGTGGGCG GCGGAGAGGG TGACCCCCTC AGCATCCAGG TCTCCGACCT CAAGCCCGGC
GACTCCGGCG AGGGCGAGTT CTGCTTCTCG ATCGTCGACA ACCCCGCGTA CATGTGGATG
TGTGGCGCGG TGACTGAGAA CAACGAAAAT GGGCAGTCCG AGCCCGAGAT GGACGCCGAC
ACGACCGGCG GCGACCCCGG CGAAGGCATG GGCGAACTCG CCGACGCGAT GCAGGTGACT
GTCTCGTACT GCACCGACGA CGACGGCGAA TACGCTCTCG GCGAGGAGAT CGCTTCCGGC
TCGCTGGCGG ACGTGATGAG CGCGCTCGAC AACGGCATCC CCCTCTCCGG CGACGGCGAC
GCGGAGGCCC CGGTCGACGG CCGCGCGCCC TTCGAGGGCG TCGACTCGGC TTTCGTCAAC
GAAACCGAGG TCAACGCGGC CGAGCAGTGC GTCTGCTTCG AGTGGGAGGT CCCGTTCGAC
GTGGGCAACG AGATTCAGAC CGACTCTGTC GCGTTCGACT TCGAGTTCTA CGCGGTGCAG
TCGCGCCACA ACGACGGCTC GGCCAACCCC TGTATCACCT CCCGTGAGGT CGAGGGCTTC
GGCAAGCAGG ACTACGAGCC GGACGCCGAC GTGCTGTGGG CCTCCAAGGC GCGCAACGGC
GGCTCCAACA CCTTCGAGCT GATCGTGGGC GACGACAACA GCAACGCCGA CACCGCCGAC
TACGACTTCG GCGGCAGCAG CTTCGACGGT GACCTGACGG TCGCGTACGA CGCCGACACC
GGCGAAGCGA CTCTCGAACT CGCCAACGGT ACCACCACCG ACGTCAGCTA CGCCGTCAGC
AACGCCGCCG GCGACGTGAT CTCTATCGTC GCGCGCGGCA GCGACGCGAG CCACCTCGCG
AGCGTCTCGA ACGTCCGGGT CAACGGGACG GCCCCAACTG GTCCCGACGC AGTCGAGGCG
GACGGCAGCG AGACCGTCTC TCTCCTGATC GAGGACGTCG ACGCCAGCGC CGACTGGGAA
CTGACCGCGG ACGTGGCGTT CGAGGGCCTC GACGACGACC CGAGCGCTTC GGACGAGAAC
CCCGCAGTGT ACGTCGAGGT GCTCGACGCG TAG
 
Protein sequence
MNDDTIGLSR RKMLVGLGAV GVASAGAGLG TTAYFNDTES FDDNTLTAGE LDLFVHVDYS 
EDQGSYAQYS TPDGTFIDGN VVGGGEGDPL SIQVSDLKPG DSGEGEFCFS IVDNPAYMWM
CGAVTENNEN GQSEPEMDAD TTGGDPGEGM GELADAMQVT VSYCTDDDGE YALGEEIASG
SLADVMSALD NGIPLSGDGD AEAPVDGRAP FEGVDSAFVN ETEVNAAEQC VCFEWEVPFD
VGNEIQTDSV AFDFEFYAVQ SRHNDGSANP CITSREVEGF GKQDYEPDAD VLWASKARNG
GSNTFELIVG DDNSNADTAD YDFGGSSFDG DLTVAYDADT GEATLELANG TTTDVSYAVS
NAAGDVISIV ARGSDASHLA SVSNVRVNGT APTGPDAVEA DGSETVSLLI EDVDASADWE
LTADVAFEGL DDDPSASDEN PAVYVEVLDA