Gene Hhal_2380 details

Gene Information

• Locus tag: Hhal_2380
• ID: 4711098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 2615821
• End bp: 2617866
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639856855
• Product: hypothetical protein
• Protein accession: YP_001003945
• Protein GI: 121999158
• TIGRFAM ID: [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.573716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCGAA CCACCACCAA ATTGGGAAGC TCACTGGCGC TATCGGCGAC GGCATTATTC 
ATCGTGGCCG GCGCCGATGC CGGCACGCCC GAGTCCTCCG CGACCTTTGT GGGTCCGACG 
GAGTCGGAGA TCTGGCTCGG CTTCGGCTAT CTAGATCAGG ACAACAGCCA CTTCCGCCGC 
TACACGGGGC CCGTCGAGGA CGGGCTCTAC CCGGCCCTGG AGCTTGATCT GCGCTATCGC 
GGCGAGGACG AACAGGAAGG ACGGTATGGC CGCCTTGAGG GGCGCGATCT GGGGCTGGAT 
TCGCGGCGCC TGCGTGGCCG CTACGGGGTA CAGGGGTCCT ACGGGCTGCA TCTGCAGTAC 
GACGAGCTGC CGCGATCTTA CGATCACGAT GTGGTCAGCC CGTTGCGGGA TGAGGGGGGT 
GATCTGCGGT TGCCTCAAGT GACCGGCGAC GTCGAGACCG ACAGCCGTGA CTGGGAAGTG 
GGCACCCAGC GTGAACGCAC AGCGGTGGGG GCCCATCGCG TCCTCGGCGA CAACTGGAAA 
CTCGATGTTG GTTTCAGCCG CGAGGAGAAG GAGGGGCACC AGTACCGCGG CTATGGCATA 
TGGAGCGATG CGGCGCCGCG GGGGTTCCAG ATGCCCGCCC CGGTGGATCA GCGCACCGAC 
CAGCTCGACC TCGGTGCGGA GTACGCCGGT GATGCCCTCC AGGCGCGGGT TGGCTATCAC 
CTCTCCGAGT TCACGCAGCT CAGCGGAGAC TCTTTCGACG TCGACGACCC CCGAGCGGAT 
GACTGGACCA ATCTAGAGGA GGGTGATCGG CACCGCCTGT CCCGGCCCCC GGAGAACCGC 
TACCATCAGT TCAGTGGCTC CATGGCGTAC GCCCTGCAAC CGGGCACGTC GGTCAGCGGC 
AGCCTGGTCT ACGGGCGCGC GGAGCAGGAT GAGTCCTTCA TCGACGATTC GGCCTACGAG 
GACGTCCTGG ATGTCCTCGG CAACAACCTC GATGGCCGGA TCGATACGAC CCGTCTAGGT 
CTCCAGGGTA CACATCGCTT CCACCCCCGC GTACGGGTGA AGGCGGAGTA CGAGTACGAG 
GACCGGGACA ACCAGTCGGC TCAGTGGGAC GACCTGCCGA CCATGAACCG CTCCACGCGC 
GTTCACGACT GGACCCGCCA CAGGGCGGGG TTCGATGCGG ACTTCCGGCT GCCGATGCGC 
AGTAATCTGA TGGTCGGTTA CCAGTACGAG GAGAAAGATC GTACCTACGC CGACGACGAA 
ACCATCGAAG ACACCTACCG CGGCCGTCTG CGCAGTCAGC CCACCGACAA TCTGAGCATA 
ACCGTGCGCG GTGCGTATAT GGACCGGTGG GGGGCGAGCT ATGCCGGGGG TGGCTCGGCT 
CTGGCCGATA ATATTCCGGA GCTCGATCTT TACCACATGG CCGATTTGAC GCGGCTGGAT 
ATCGGTGCGA GCGCTACCTA CCACCTTATC CCCGAGCTTG CTCTAGGTGC CGAGTTCACT 
TACCTCGAGG ATGACTATGT GCACTCGGAT GCCGGCCTTG AGGGCGATGA CCGCAGCGCC 
GTCACCCTCT CCGCCGACTA CTTCCCGGTA GAGACCACCA GCGGTTACGC CTTCCTCACC 
TACGAGGAGC GGGATCGCGC CCAGGGCGGT GACGACCGCA GCCTGACCCA GGAGGAGGAG 
ATCCTCACCC TCGGGGTCGG CGGCGAGACG AGCCTCGACA ACGATCAGCG CTGGACGCTC 
GGTACCGAGC TGCTCTACGC CACCTCGGAC AGCGACATCC TCGTCGCCGA CCCCGACGGC 
GACCAGCGCT ACCCGACCCT CGAGACCCGT CTCACCCAGC TCCAGCTCTA CGGCGAGCAC 
CAGATCACCG ACTCCGGATG GGTGCGCCTC GCCTACGTCG GTCAGCGCTT TGAAGAGCAG 
GACTGGATGA AAGGCTTTGG CCCCGACCCC GACCCCGACG ACGACGGCGA ATTCGTGCTC 
ATGGGGCGGG AGGCCTACGA CTACACCGCT CACCTGGTCG TCGGATCGGT GGGCTTCAAG 
TTCTGA 

 

Protein sequence

MTRTTTKLGS SLALSATALF IVAGADAGTP ESSATFVGPT ESEIWLGFGY LDQDNSHFRR 
YTGPVEDGLY PALELDLRYR GEDEQEGRYG RLEGRDLGLD SRRLRGRYGV QGSYGLHLQY 
DELPRSYDHD VVSPLRDEGG DLRLPQVTGD VETDSRDWEV GTQRERTAVG AHRVLGDNWK 
LDVGFSREEK EGHQYRGYGI WSDAAPRGFQ MPAPVDQRTD QLDLGAEYAG DALQARVGYH 
LSEFTQLSGD SFDVDDPRAD DWTNLEEGDR HRLSRPPENR YHQFSGSMAY ALQPGTSVSG 
SLVYGRAEQD ESFIDDSAYE DVLDVLGNNL DGRIDTTRLG LQGTHRFHPR VRVKAEYEYE 
DRDNQSAQWD DLPTMNRSTR VHDWTRHRAG FDADFRLPMR SNLMVGYQYE EKDRTYADDE 
TIEDTYRGRL RSQPTDNLSI TVRGAYMDRW GASYAGGGSA LADNIPELDL YHMADLTRLD 
IGASATYHLI PELALGAEFT YLEDDYVHSD AGLEGDDRSA VTLSADYFPV ETTSGYAFLT 
YEERDRAQGG DDRSLTQEEE ILTLGVGGET SLDNDQRWTL GTELLYATSD SDILVADPDG 
DQRYPTLETR LTQLQLYGEH QITDSGWVRL AYVGQRFEEQ DWMKGFGPDP DPDDDGEFVL 
MGREAYDYTA HLVVGSVGFK F