Gene Hhal_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2230 
Symbol 
ID4709518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2443928 
End bp2444560 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID639856706 
Producthypothetical protein 
Protein accessionYP_001003796 
Protein GI121999009 
COG category[S] Function unknown 
COG ID[COG4764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCAG GGCGAATCCT GCGGATCCTT GGGGTTGCGG TGCTGCTGGT GTTGGCCGGG 
TGTGCCCATC GCCCGCAACC ATCGGATATC AACGACATCT GCGTCGTCTT CGAGGAGAAC 
CCGGAGTGGT ATGATCACGC CCGGCGCTCC GAGGAACGCT GGGGTACGCC GATTCCCATC 
CAGATGGCCT TTGTCCATCA GGAGTCGTCG TTCATCGCCG ACGCTCGCCC GCCGCGGCGG 
CGTCTGCTCG GGTTCATCCC GTGGCGTCGC CCGAGTTCCG CCTACGGTTA CGCCCAGGCG 
CAGGATCCGG TCTGGGGCGA GTACCGGGAG GACGCCGGCC ACTGGGACGC CCACCGCACC 
CGGATGCGCG ACGCCCTGGA CTTCATTGGC TGGTACAACC AGCGCACCCG GGAGCGGGTC 
GGGGTCGACC TGGACGACCC GCGACGGCTC TACCTGGCCT ACCACGAGGG GCACGGCGGG 
TATCGCCAGG GTAGCTACCG CCAGAAGCCG ACCCTGCAGC GGGTCGTCCG TAACGTCGAG 
GCCCGGGCCC GCCGTTACGA GGAGCAGCTG GCCGGGTGCG AAGACGATCT GCAGTGCTGG 
CGCTGGTACC AGTTCTGGCC TTTCTGCCGG TGA
 
Protein sequence
MAPGRILRIL GVAVLLVLAG CAHRPQPSDI NDICVVFEEN PEWYDHARRS EERWGTPIPI 
QMAFVHQESS FIADARPPRR RLLGFIPWRR PSSAYGYAQA QDPVWGEYRE DAGHWDAHRT 
RMRDALDFIG WYNQRTRERV GVDLDDPRRL YLAYHEGHGG YRQGSYRQKP TLQRVVRNVE 
ARARRYEEQL AGCEDDLQCW RWYQFWPFCR