Gene Hhal_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2166 
Symbol 
ID4709322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2379213 
End bp2379830 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID639856641 
Productputative CheW protein 
Protein accessionYP_001003732 
Protein GI121998945 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.260989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG ACAGCGAGCA CGGCACCCTC GGAGACGACC GCAAGGCAGC CGCACTGGGC 
AGTGGTGCAG ACACTGTTGA CGCCATGCAG GCTGCAGCCG ATGGCGATCA GTACCTGACC 
TTTACTCTCG GCGAGGAGGA GTACGGGGTC GATATCCTGC GTGTGCAGGA GATCAAGGGT 
TGGCAGCGGG TTACGCCCAT TCCCAACACG CCCCACTACG TCAAGGGTGT CATCAACCTG 
CGCGGCACCA TCGTCCCGGT CATCGATCTG CGGGAACGTT TCGGGATGCA GGCGCAGGAA 
TACAGCAAGT TCACCGTGGT GGTCATGGTC CGGGTGGTCG CCCGCGGCGG CCGGGAGCGG 
ATCATGGGCC TGGTGGTGGA CGCGCTGTCG GAGGTTTACA CCTTCCAGTC CGAGCAGATC 
CGCCCGGCAC CGGAGTTCGG TGCCGCGCTA CGCACCAACT TCATCCGTGG CCTGGCCACG 
GTGGACGAGA ACAAGATGGT GATCGTCCTC GACGTCGATG AGCTGCTCAG CGACGAGGAT 
CTCGCCATCG CCGATGATCA GAGCCGCATC GCCGAGGTGG TCCGCTCGGC CGGGCAGGAG 
GGTACCCCCG ATGAATGA
 
Protein sequence
MTQDSEHGTL GDDRKAAALG SGADTVDAMQ AAADGDQYLT FTLGEEEYGV DILRVQEIKG 
WQRVTPIPNT PHYVKGVINL RGTIVPVIDL RERFGMQAQE YSKFTVVVMV RVVARGGRER 
IMGLVVDALS EVYTFQSEQI RPAPEFGAAL RTNFIRGLAT VDENKMVIVL DVDELLSDED 
LAIADDQSRI AEVVRSAGQE GTPDE