Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2139 |
Symbol | |
ID | 4711222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2340964 |
End bp | 2341428 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639856613 |
Product | hypothetical protein |
Protein accession | YP_001003705 |
Protein GI | 121998918 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.895316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATCC ACCTCGTCGC AGTAGGCCAC AAACCGCCGC GCTGGGTGCG CGACGGTCAC GAGACCTACG CCCAGCGCCT GGGCAAGGGG TGGCGGCTGG AGCTGCACGA GGTTGGCGCC GGCGGGCGCG GGAATGACGA CCCACAGGCC CGTGAGCGCG AGGGCGAGCG CCTGCTGCGC GCGTTGCCCT CGCGGGCGGT CTGTGTGGCC CTGGACGAGG GCGGCACGCC GCGGGACACC CGGCAGTGGG CCCGCAGCCT GGAGCGCTGG AGCCATGAGG GCGGCGAGGT CGCGTTCATC ATCGGCGGGG CCGACGGGCT GAGCGATGCG GTGCGCCAGC GCGCCGACGC CTGCTGGTCG CTGTCGCCAC TGACGTTACC GCACATGCTG GTGCGGGTGC TGGTGGCCGA GCAGGTCTAT CGTGCCTGGA CGCTGCTCAG CGGCCATCCG TATCATCGAT CGTGA
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Protein sequence | MRIHLVAVGH KPPRWVRDGH ETYAQRLGKG WRLELHEVGA GGRGNDDPQA REREGERLLR ALPSRAVCVA LDEGGTPRDT RQWARSLERW SHEGGEVAFI IGGADGLSDA VRQRADACWS LSPLTLPHML VRVLVAEQVY RAWTLLSGHP YHRS
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