Gene Hhal_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2139 
Symbol 
ID4711222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2340964 
End bp2341428 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content72% 
IMG OID639856613 
Producthypothetical protein 
Protein accessionYP_001003705 
Protein GI121998918 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.895316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATCC ACCTCGTCGC AGTAGGCCAC AAACCGCCGC GCTGGGTGCG CGACGGTCAC 
GAGACCTACG CCCAGCGCCT GGGCAAGGGG TGGCGGCTGG AGCTGCACGA GGTTGGCGCC
GGCGGGCGCG GGAATGACGA CCCACAGGCC CGTGAGCGCG AGGGCGAGCG CCTGCTGCGC
GCGTTGCCCT CGCGGGCGGT CTGTGTGGCC CTGGACGAGG GCGGCACGCC GCGGGACACC
CGGCAGTGGG CCCGCAGCCT GGAGCGCTGG AGCCATGAGG GCGGCGAGGT CGCGTTCATC
ATCGGCGGGG CCGACGGGCT GAGCGATGCG GTGCGCCAGC GCGCCGACGC CTGCTGGTCG
CTGTCGCCAC TGACGTTACC GCACATGCTG GTGCGGGTGC TGGTGGCCGA GCAGGTCTAT
CGTGCCTGGA CGCTGCTCAG CGGCCATCCG TATCATCGAT CGTGA
 
Protein sequence
MRIHLVAVGH KPPRWVRDGH ETYAQRLGKG WRLELHEVGA GGRGNDDPQA REREGERLLR 
ALPSRAVCVA LDEGGTPRDT RQWARSLERW SHEGGEVAFI IGGADGLSDA VRQRADACWS
LSPLTLPHML VRVLVAEQVY RAWTLLSGHP YHRS