| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2055 |
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| Symbol | rho |
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| ID | 4710011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2258120 |
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| End bp | 2259379 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856528 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001003621 |
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| Protein GI | 121998834 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.224008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCA CCGAGCTCAA GAGAAAGCCA GCCACCGAAC TCCTGGAGAT CGCCCAGTCC
ATGGGCATCG AGGGCACTGC CCGCTCCCGG AAGCAGGACA TCATCTTCGC CATCCTCAAG
GCTCATGCCA AGAACGGCGA TTCCATCTAC GGCGACGGCG TCCTCGAGAT CCTCCAGGAC
GGCTTCGGCT TCCTGCGCTC CGCGGATGCC TCGTACATGG CCGGGCCGGA CGATATCTAC
GTCTCGCCCA GCCAGATCCG CCGGTTCGCA CTGCGCACCG GCGACACCAT CACCGGCAAG
ATCCGCCCCC CGAAGGACGG CGAGCGCTAC TTCGCCCTGC TCAAGGTCGA CCAGATCAAC
TTCGAGCCGC CGGAGGCGGC CAAGAACAAG GTCCTCTTCG AGAACCTCAC TCCGCTGTTC
ACCCGCGATC GCATGCGCAT GGAGCGGGGC AACGGCTCCA CCGAGGACCT CACCGCCCGG
GTCATTGACC TGGTGGCGCC TATCGGCAAG GGCCAGCGCG GGCTGATCGT CTCGCCCCCG
AAGGCCGGCA AGACGATGAT GCTCCAGAAC GTCGCCCAGA GCATCACCTA CAACTACCCG
GAGTGCTACC TCATCGTCCT GCTCATCGAC GAGCGGCCCG AGGAGGTCAC TGAGTTCGCC
CGCTCGGTGC TCAGCGCCGA GACGGTCTCC TCGACCTTCG ACGAGCCGGC CTCGCGCCAC
GTCCAGGTCG CCGAGATGGT CATCGAGAAG GCCAAGCGCC TGGTCGAGCA CAAGAAGGAC
GTGGTCATCC TGCTCGACTC CGTCACCCGC CTGGCGCGCG CCTATAATAC GGTGGTGCCG
TCGTCCGGTA AGGTGCTCAC CGGGGGCGTG GATGCCAACG CCCTGCACCG GCCCAAGCGC
TTCTTCGGTG CCGCGCGCAA CGTCGAAGAG GGCGGCAGCC TCACCATCCT GGCCACCGCC
CTGGTCGAGA CCGGCTCGCG CATGGACGAG GTGATCTACG AGGAGTTCAA GGGCACCGGC
AACATGGAGC TGCACATGGA CCGGAAGATC GCCGAGAAGC GCATCTACCC GGCCATCCAC
CTGAACCGCT CTGGGACCCG GCGCGAGGAA CTCCTGATGA CCCCCGAGGA GCTGCAGAAG
ACCTGGATCC TGCGCAAGCT CCTGCACAAC ATGGACGAGG TGGCCGCCAT CGAGTTCCTC
CTCGACAAGC TCAAGGACAC CAAGACCAAC ACCGAGTTCT TCGAGGCCAT GAAACGCTGA
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| Protein sequence | MNLTELKRKP ATELLEIAQS MGIEGTARSR KQDIIFAILK AHAKNGDSIY GDGVLEILQD
GFGFLRSADA SYMAGPDDIY VSPSQIRRFA LRTGDTITGK IRPPKDGERY FALLKVDQIN
FEPPEAAKNK VLFENLTPLF TRDRMRMERG NGSTEDLTAR VIDLVAPIGK GQRGLIVSPP
KAGKTMMLQN VAQSITYNYP ECYLIVLLID ERPEEVTEFA RSVLSAETVS STFDEPASRH
VQVAEMVIEK AKRLVEHKKD VVILLDSVTR LARAYNTVVP SSGKVLTGGV DANALHRPKR
FFGAARNVEE GGSLTILATA LVETGSRMDE VIYEEFKGTG NMELHMDRKI AEKRIYPAIH
LNRSGTRREE LLMTPEELQK TWILRKLLHN MDEVAAIEFL LDKLKDTKTN TEFFEAMKR
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