| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2025 |
|---|
| Symbol | |
|---|
| ID | 4710378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2227836 |
|---|
| End bp | 2228804 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639856498 |
|---|
| Product | mutator MutT protein |
|---|
| Protein accession | YP_001003591 |
|---|
| Protein GI | 121998804 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein
[TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.153674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATACGG CATCGCCCGC CGCGCCGATC CACGTGGCCG CCGCCGTGGT CCGCGGCGAA
GACCAGCGCG TACTGGTCCA GTGCCGGCCG GATCACCTCG ATCACGGCGG TCTGTGGGAG
TTCCCCGGGG GCAAGATTGA GCCCGGTGAG TCGGTCGCCG ACGCCTTGGT CCGCGAGCTG
GACGAGGAGC TGGGTATCCG TGTCCGTCCG GGGGCGCTGC GCATCCGCGT GCCGTGGGAC
TACGGCCACC GGCGCGTGGT GCTCCACGTC CTCGATGTGA ACGAGTGGAC GGGGCGTCCC
ATCGGCCGCG AGGGCCAGGC GGTGGACTGG CTCACCCCCG AGGCGATGGC CGAGCGGGCC
TGGCCCGCCG CCAACTGGCC GATCATCCGT TCGCTGCAGC TCCCCGACCG GTATCTGATC
ACCCCCGTGG AGCCAGCGGA TGCCGATGCC TGGCTGGCCC GACTGGATGC GGCCCTGGCG
CGCGGTGTGC GCCTGGTTCA GCTGCGTCGC CCAGATCTCG ACGTGGAGGC CTGGGTGCGT
CTGGGGCGCG CCCTGCGCCG GCGCTGTGAC GCCCACGGTG CGTGGCTGCT AGCCAACGGA
CCGGCGGAAC AGGCCCGGGC GGTGGGCGCC GACGGGGTGC ACTGGAGCAG TCGCGTGCTG
GCCGAGGGGC CGCAACGCCC GGGGTGGGCG CGGTGGGTGG GCGCTTCTTG CCACAACGGC
GACGAGCTGG AGCGCGCCGC CGCCTGCGGG GCCGATTTCG CGCTGTTGTC ACCGGTGCAG
TGGACGGCCA GCCATCCGGA ACAGAGCGGC ATGGGGTGGG AGCGTTTCGC CGCCTGGGTG
GCCGGGGCGC GCCTGCCGGT CTACGCCCTC GGCGGCGTGG GCCCGGCGGA TATCCACCGG
GCTCGGGCCT GCGGCGGGCA GGGAGTGGCG GCTATCCGCG GCCTGCTGGC GGAGGCGGGC
CGCCGATAG
|
|---|
| Protein sequence | MHTASPAAPI HVAAAVVRGE DQRVLVQCRP DHLDHGGLWE FPGGKIEPGE SVADALVREL
DEELGIRVRP GALRIRVPWD YGHRRVVLHV LDVNEWTGRP IGREGQAVDW LTPEAMAERA
WPAANWPIIR SLQLPDRYLI TPVEPADADA WLARLDAALA RGVRLVQLRR PDLDVEAWVR
LGRALRRRCD AHGAWLLANG PAEQARAVGA DGVHWSSRVL AEGPQRPGWA RWVGASCHNG
DELERAAACG ADFALLSPVQ WTASHPEQSG MGWERFAAWV AGARLPVYAL GGVGPADIHR
ARACGGQGVA AIRGLLAEAG RR
|
|---|
| |