| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2020 |
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| Symbol | |
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| ID | 4710385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2223153 |
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| End bp | 2224313 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639856493 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001003586 |
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| Protein GI | 121998799 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.453944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACG ATCGCGCCAC GGTCCGCCTC GTGGACCGTC TTCTTGCCGA CGCCGTGCGG
CGTCGGGCCT CGGATATCCA CCTGCAACCG GAGGCCGACC GGGTGCGCGT GCGCCTGCGC
ATCGACGGCC TGCTGCGCGA GGCCGAAGGG CCACCGCCGG GCCTGCGCGG ACGGGTTGCG
GCACGCATCA AACTGCTGGC GGGGATGGAC GTCGCCGAGC AACGCCTGCC CCAGGACGGC
CGGCTGGAGG CCCGGGACGG CGACGGGCAG CGGGTGCAGT TCCGCGTCGC CAGCTGCCCG
GGCGTCCACG GCGAGAAACT GGTCCTGCGC CTGATCGAGC AGGACGCCCC GGCCACCCTC
GACGCCCTGG ACCTCCCCGG CCCGGCCCGG GCGGCACTGG AGTCGGCCCT CGACCGCCCC
GACGGACTGA TCCTGGTCAC CGGCCCCACC GGCTCCGGCA AGACCGCGAC CCTGCACGCC
GCCCTGCGGC GGCTGAACAC CCCCGAGCGC AACATCTGCG CCGTGGAGGA TCCCGTGGAA
ATGGACACCC CCGGGGTCAA CCAGGTGGCC GTGAACCGCC GCGCCGGTAT CGACTTCGCC
CAGGCCCTGC GCGCCTTCCT GCGCCAGGAT CCGGACGTGA TCATGATCGG CGAGATCCGC
GACGCCGAGA CCGCCGCCAT CGCCGTCAAG GCGGCCCAGA CCGGCCACTT GGTCCTCTCA
ACCCTGCATA CACGCAGCGC GCCGGGCGCG GTGGAGCGCC TGGCGCAGAT GGGTCTGCCC
GGCTACGACC TGGCCTCGAG CCTCTCCCTG GTGGTGGCGC AGCGCCTGGT CCGCCGCCTC
TGCCCGGCCT GCCGCGAGAC CAGCAGCGCC GCCGCTCAGC CGGCGGCAGC GGAGCCGGCC
GGCGTCTACC ACCCCCGCGG GTGCCCGGAG TGCCAGGACG GCTATCGCGG TCGGCGGGGG
GTCTTTCAGG TCATGCCGAT GACCGACGCC GTGGCCGATG CCGTCCTGCA TGGCCCTTCG
GCCCGCGAGA TCGAAGCCCG CGCCCGGGCG GCGGGCATGC CGGATCTCCA CGACGCCGGC
TGGCCCCTGG TGGAGACCGG CGAGACCAGC GCCGCCGAAC TACGCCGCGT CACCCGCGAG
GCCGAGCCGT GGCCCGCCTG A
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| Protein sequence | MDDDRATVRL VDRLLADAVR RRASDIHLQP EADRVRVRLR IDGLLREAEG PPPGLRGRVA
ARIKLLAGMD VAEQRLPQDG RLEARDGDGQ RVQFRVASCP GVHGEKLVLR LIEQDAPATL
DALDLPGPAR AALESALDRP DGLILVTGPT GSGKTATLHA ALRRLNTPER NICAVEDPVE
MDTPGVNQVA VNRRAGIDFA QALRAFLRQD PDVIMIGEIR DAETAAIAVK AAQTGHLVLS
TLHTRSAPGA VERLAQMGLP GYDLASSLSL VVAQRLVRRL CPACRETSSA AAQPAAAEPA
GVYHPRGCPE CQDGYRGRRG VFQVMPMTDA VADAVLHGPS AREIEARARA AGMPDLHDAG
WPLVETGETS AAELRRVTRE AEPWPA
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