Gene Hhal_2008 details

Gene Information

• Locus tag: Hhal_2008
• ID: 4710299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2211683
• End bp: 2212291
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639856481
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_001003574
• Protein GI: 121998787
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.1474
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGGA TCAGTGTCGC CCTGACCGGC GCCTCGGGTA TGCAGTACGG GCTGCGTCTG 
ATCCAGGCCC TGGCCGGAGC CGGCGAGACC GTCCACCTCC TGGTCTCCGA TGCCGCCCGA 
GTGGTGGCCG GACTGGAAAC CGACACCCCG CTACCCCGAC GCTCCGGGGA GCTGCATCGC 
GAGCTGGTCG CGGCGCTGGG CATCGATCCG GCGCGGCTCT ACGTCTACAG TGAACAGCAA 
TGGACGGCAC CGCTAGCCTC CGGCTCGGCG GCACCCCAAC GCATGGTGGT GTGCCCCTGC 
ACCACGGGCA CCCTGGCGGC CATTGCCGGC GGACACTCCG ACAGCCTGAT CGAGCGTGCT 
GCGGATGTGG TCATCAAAGA GCGCGGACGG CTGGTGGTGG TCCCGCGGGA GACGCCCCTG 
TCGGCGATCC ATCTGGAGCA CATGCTGTCC CTGACGCGGC TGGGGGTGGT GGTCCTGCCC 
GCCAACCCGG GGTTCTACCA TCGACCCCAG CGGGTCGAGG ATCTGATCGA TTTCGTCGTC 
GCGCGGATTC TGGATCATCT GCATGTGGCC CACGATCTGG GTCCCCGCTG GGGCAAGGAG 
GGCAATTGA 

 

Protein sequence

MSGISVALTG ASGMQYGLRL IQALAGAGET VHLLVSDAAR VVAGLETDTP LPRRSGELHR 
ELVAALGIDP ARLYVYSEQQ WTAPLASGSA APQRMVVCPC TTGTLAAIAG GHSDSLIERA 
ADVVIKERGR LVVVPRETPL SAIHLEHMLS LTRLGVVVLP ANPGFYHRPQ RVEDLIDFVV 
ARILDHLHVA HDLGPRWGKE GN