Gene Hhal_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1979 
Symbol 
ID4710334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2181041 
End bp2181610 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID639856452 
Productelongation factor P 
Protein accessionYP_001003545 
Protein GI121998758 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCT ATAGCACCAA CGAGTTTAAG GGCGGGCTCA AGATTATGCT CGACGGGGAT 
CCTTTCACCA TCGTCGAGAA CGAGTTCGTC AAGCCCGGCA AGGGGCAGGC CTTCAACCGG 
GTCAAGCTGC GCAATCTGAA GACCAATCGT GTCGTCGAGA AGACGTTCAA GTCCGGCGAG 
AGCGTCGAGG CGGCCGACGT CATGGAGACC GAACTCCAGT ATCTCTACAA CGACGGCGAG 
TTCTGGTACT TCATGGATCC CACCTCCTTC GAGCAGAAGG CGGCCCCGAG CAGTGCCGTG 
GGGGATGCCG CCAACTGGAT CAAGGAGCAG GATACCTGCA CCGTCATCCT GTGGAACGAC 
ACCCCGCTGC AGGTGGAGGC GCCGAACTTC GTCGACCTCA AGGTCATCGA GACCGATCCG 
GGCGTGCGCG GGGATACCAG CAGCGGCGGG ACCAAGCCGG CCAAGCTGGA GACCGGCGCC 
ACGGTGCGCG TGCCCCTGTT CATCGAGGAA GGCGAGGTGC TGCGCGTCGA TACCCGCAAG 
GCGGAGTACG TCAGCCGCGC CAAGGACTGA
 
Protein sequence
MATYSTNEFK GGLKIMLDGD PFTIVENEFV KPGKGQAFNR VKLRNLKTNR VVEKTFKSGE 
SVEAADVMET ELQYLYNDGE FWYFMDPTSF EQKAAPSSAV GDAANWIKEQ DTCTVILWND 
TPLQVEAPNF VDLKVIETDP GVRGDTSSGG TKPAKLETGA TVRVPLFIEE GEVLRVDTRK 
AEYVSRAKD