Gene Hhal_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1962 
Symbol 
ID4710351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2157833 
End bp2159083 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content72% 
IMG OID639856435 
Productpolysulphide reductase, NrfD 
Protein accessionYP_001003528 
Protein GI121998741 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAC GGATTCGTTA TCAACACCTG GGCACACGCC ACCCGCTACG CTGGGCTGCG 
GCCCTGGCCG GTGCCGGCCT GCTGACGCTG ATCGGGGCGG CGGCAGGGCT CTACCTCATC
GTCGCCGGTC ACCACCTGAC CGGCATGGGT CAGCAGGTGG TCTGGGGCTG GCCCCATGTG
GTCGCCATCG GCCTGATCCT CGCCGGCAGC GGGGCTTTCG CCCTGGCGGC GCTGGCCCCC
ACCACCCTGG GACACCCGGG CGAGCCGTGG GCACGCCTGG GCACGGTGGC CGCCGCGGCC
CTACTGATTG GCGGACTCGC GGTCCTCAGT CTGGACCTGG GCAGCCCGCA GCGCATCCTT
CCGCCGCTGG AGCTCAATCT GATGTCGAGC TTCAGCCGCA ACCTGTTCCT CTACACGGCG
TTCCTGATCA TCGCCTTGCT CTATCTGGCC ACCCTGCTGG AACCGCGCCT GCGCCGTTTC
GCTGCGGCAG CCGGCGGCCT GGCCGCCGCG GTGGCGGTCC TCCTGGCGCT AAACGTCGGC
TCGATCTTCG CCATGCTCGC CGCCCGCCCG GTGTTCGGCG GCGCCATCAT GATGCCGCTC
TTCCTCGCCG CCGCCCTGAC CCTGGGCACG GCGACCCTCT CCCTGATCTG GCTGGCGGTG
CTGCGCGCCC AGGGCCAGGA GCCACCGCCG CGGGCCACCG GGCGCCTGGG CGCCCTCCTG
CTGATCGCTG TACTGGCCCT CGCCGCCCTG CTGGCGCTGC ACTTCCTGAC CCTCGCCTAC
CAGCCGGGCC ATCGGGAGAT CGCCCGTTTC CTCCTCGTCG ACGGCGGCGT CTACCCGGTC
GTGTTCTGGA TCGGGGTAGT CGCTGTCGGC ATCATCACGC CCACTCTCCT CCTGCTGCGG
AAGGCGGCCC GCGCTCGCGG TCAGGCCCTC GCCTGGGCCT CGGGGGTTGC CCTGATCGGC
GGGTTCGCCC ATCTTTTCGT GATGATCGTC GGTGCCCAGG CCTTTCCGCT GCAGATCTTT
CCCGGGCGAG AGGTCGAGGG GGCCGTCTTC GACGGGGAGG CTGCCTCTTA CCTGCCCAGC
GCCTGGGAGG CGCTGCTCGG GCTGGCCGGC CCCGGGCTGG CCCTGCTGAT CCTGCTCCTG
GCCCTGCGGG CACTGCCACT GACGGCGGTG CACTTCCCGG GGGAGCCGGC GGCGGCAGAC
GGGCCGATGG CGGCAGCCGA TGCAGGAACG GCCGCCGAGC CCAGCCAGTG A
 
Protein sequence
MAARIRYQHL GTRHPLRWAA ALAGAGLLTL IGAAAGLYLI VAGHHLTGMG QQVVWGWPHV 
VAIGLILAGS GAFALAALAP TTLGHPGEPW ARLGTVAAAA LLIGGLAVLS LDLGSPQRIL
PPLELNLMSS FSRNLFLYTA FLIIALLYLA TLLEPRLRRF AAAAGGLAAA VAVLLALNVG
SIFAMLAARP VFGGAIMMPL FLAAALTLGT ATLSLIWLAV LRAQGQEPPP RATGRLGALL
LIAVLALAAL LALHFLTLAY QPGHREIARF LLVDGGVYPV VFWIGVVAVG IITPTLLLLR
KAARARGQAL AWASGVALIG GFAHLFVMIV GAQAFPLQIF PGREVEGAVF DGEAASYLPS
AWEALLGLAG PGLALLILLL ALRALPLTAV HFPGEPAAAD GPMAAADAGT AAEPSQ