| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1946 |
|---|
| Symbol | |
|---|
| ID | 4710592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2143524 |
|---|
| End bp | 2143850 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639856419 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_001003512 |
|---|
| Protein GI | 121998725 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0592942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAT CGTCGCGCAG GGCACTGCTC AGCGGTGCCA CCCTATTCGG TCTGCTATTC
GGCGGGGGGG CGGCCACGGC CGGCGATGGC GGGATCTCCG AGGGGGAGAT GATCGCCAAC
AGTTGCCTGG CCTGCCACGG CCCCGGCGGC CAGGGGGCGG AGAGCATGCC GCCGCTGGCC
GGCTGGGATG AAGAGGCCCT GGTGGAGGTG ATGAGAGACT TTCGCGAAGG CCGGGGGGAT
CCCACGGTGA TGGATCGGCA CGCCACCGGC TACACCGATG AGCAGCTGCG CGCGGTCGCG
GCCTACCTCG CAGCAATGGA TCAATAG
|
|---|
| Protein sequence | MQQSSRRALL SGATLFGLLF GGGAATAGDG GISEGEMIAN SCLACHGPGG QGAESMPPLA
GWDEEALVEV MRDFREGRGD PTVMDRHATG YTDEQLRAVA AYLAAMDQ
|
|---|
| |