| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1878 |
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| Symbol | |
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| ID | 4710875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2055209 |
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| End bp | 2057344 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856351 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001003444 |
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| Protein GI | 121998657 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAC CCACCGCGAC CCGCGAGCAG GCGCAGCAGC GCATGGCGCA GCTGCGCGGC
GAGATCAGCG AGCACGACTA CCACTACTAC GTCCTCGATC GACCGACGAT CTCGGATGCC
GAGTACGACG CCCTGTTCCG GGAGCTCCAG CGCCTGGAGG CCGCCTACCC CGACCTGGTC
AGCTCCGACT CGCCCACCCA GCGGGTCGCG GGTACGGCCC AGGAGGGGTT TGAGGCGGTT
GTCCACGACA CCCCCATGCT CTCCCTGGAC AACGCCTTCG AGGCTGACGA TCTGGTGGAT
TTCGACCGCC GTATCCGTGA CCGGCTGGGC GTGGCCAGCG TCGTCTATAC CGGTGAGCCG
AAGCTCGACG GCATCTCGCT GAGCCTGACC TACCAGGATG GCGAGCTGGT GCGGGCCGGG
ACCCGTGGCG ACGGTCACAC CGGCGAGGAC GTGACCGCCA ATGTGCGGAC ACTGCGCAGC
GTCCCCCTGC GCCTGCGTGG TGATGGCTAC CCGGGGCGCC TGGAGGTCCG TGGCGAGGTG
GTGATCCGCA AGGAGGACTT CGAACGGCTC AATCAGGCGC GCCTCGACGC CGGCGAACGG
CCCTTCGCCA ATCCTCGTAA CGCCGCGGCC GGGTCCCTGC GCCAGCTCGA CCCGCGCATC
ACGGCGCGGC GGCCGCTGAC CCTGTTCACC TTCGGCGTCG GTGACCCGCT GGCCCTGGGG
GTGGAGAGCC ATTGGCAGGT GCTGGAGTGC CTGGCCGGCT GGGGGTTTCG CACCACCGCC
CCGCTGGAGC ACCTGGAGGG TGTGTCGGCC TGCCAGGCCT ACCGGGATCG GCTCATCGAG
GAGCGGGATG CGCTGCCCTT CGAGATCGAC GGGGCCGTGT TCAAGGTCGA CGACTTGGCC
GTTCGCGAGC AGCTCGGCTT CACCGCCCGC GCGCCGCGCT GGGCGCTGGC CTTCAAGCTG
CCGGCCCGCG AGGCGACCAC CGTGGTCGAG GCGATCGTCC CCTCGGTGGG GCGCACCGGC
AAGATCACCC CGCTGGCCCG CCTGCAGCCG GTCGAGGTGA GTGGGGTGAC CGTCGCCCGG
GCCAGCCTCC ACAACGCCGA CGAACTCGCG CGTATGGACG TGCGCGAGGG CGATACGGTG
ATGGTGCGCC GGGCCGGCGA CGTGATCCCG CAGATCACCG ACGTGGTGCT GGCGAAGCGG
CCGGAGGGGG CGCAGCCGTG GCGCTTCGAG GAGCGGGTGC AGGCGTGCCC GGAGTGCGGG
TCGGCGGTTC AGCGCATCGA GGGCGAGGCG GCCCACCGTT GCGTGGGCGG CCTCTACTGC
CCGGCGCAGC GCGAGGGGGC CATCCTGCAC TTCGCCTCGC GGCGGGCCCT GGATATCGAC
GGACTCGGCG AGAAGATCGT CGAGCAGCTG GTGGCCAAGG GGTTGGTGGT GGACCTGGCC
GACCTGTTCC GGCTTGGCCA CGCCCAGCTG GCCGGGCTCG AGCGCATGGG CGACAAGTCC
GCCGACAACC TGCTCGCCGC CCTGGACCGG GCGCGGAGCA CAACGCTGGC GCGTTTCCTC
TACGCCCTGG GGATCCCCCA TGTCGGCGAG GTGACCGCCC GCCGCCTGGC CGAGGCGGCC
TACGGCCTGA TGGTCGCGGT CCCCCGTGGC GATCGGGCGG CGCTGCGCGC GGCAGCCGGT
CTGGATGCGC AAACGGCCAT CACCAGCGAG GCGCTGCTGC GGGTCATGGC GGCGCCGGCC
GACGATCTGG AGGCCATCGA AGACGTGGGG CCGGTGGTCG CCCGGGCCAT CGCCGGCTTC
TTCGCCGAGC CGCACAACCG GCAGGTGGTG GATCACCTCT GCGCCGCCGG GGTCCACTGG
CCCGAGCCGG ATCCGCCCGA GCAGGCCGAG TCGGTTTCGT CGCTGGCCGG GCGGGCCTTT
GTGGTGACCG GCACCCTGGA GACCATGACC CGGGACGAGG CCAAGGCCGC TATCGAGGCG
TGCGGCGGCC GGGTGACCGG CAGCGTCTCG CGCAAGACCG ACTACCTGGT GGCCGGGGCC
GATGCCGGCA GCAAACTGAA CAAGGCCCGC GAACTCGGTG TCGAAGTCGT GAACGAATCC
GGCCTGCGTG AACTCCTCGC TGGCGCCGGG GCCTGA
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| Protein sequence | MAEPTATREQ AQQRMAQLRG EISEHDYHYY VLDRPTISDA EYDALFRELQ RLEAAYPDLV
SSDSPTQRVA GTAQEGFEAV VHDTPMLSLD NAFEADDLVD FDRRIRDRLG VASVVYTGEP
KLDGISLSLT YQDGELVRAG TRGDGHTGED VTANVRTLRS VPLRLRGDGY PGRLEVRGEV
VIRKEDFERL NQARLDAGER PFANPRNAAA GSLRQLDPRI TARRPLTLFT FGVGDPLALG
VESHWQVLEC LAGWGFRTTA PLEHLEGVSA CQAYRDRLIE ERDALPFEID GAVFKVDDLA
VREQLGFTAR APRWALAFKL PAREATTVVE AIVPSVGRTG KITPLARLQP VEVSGVTVAR
ASLHNADELA RMDVREGDTV MVRRAGDVIP QITDVVLAKR PEGAQPWRFE ERVQACPECG
SAVQRIEGEA AHRCVGGLYC PAQREGAILH FASRRALDID GLGEKIVEQL VAKGLVVDLA
DLFRLGHAQL AGLERMGDKS ADNLLAALDR ARSTTLARFL YALGIPHVGE VTARRLAEAA
YGLMVAVPRG DRAALRAAAG LDAQTAITSE ALLRVMAAPA DDLEAIEDVG PVVARAIAGF
FAEPHNRQVV DHLCAAGVHW PEPDPPEQAE SVSSLAGRAF VVTGTLETMT RDEAKAAIEA
CGGRVTGSVS RKTDYLVAGA DAGSKLNKAR ELGVEVVNES GLRELLAGAG A
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