| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1877 |
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| Symbol | |
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| ID | 4710874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2053891 |
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| End bp | 2055108 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856350 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001003443 |
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| Protein GI | 121998656 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCCA GACCGCGTAC CCGCCTCCAG ACCGTCCTCC TGTGGGTTGC CAGTGCCCTG
ATCCTCCTCG GGGCGGTGGC CCTGTTTCGT GCCGATCTCG GCACCGGCCC CACCGGCGAG
GGGCGGGAGA CCGCCGCCGT GGCCGTCGAG GTCGACGCCG TCGAGCGCCG CGATCTGGCG
GATGTTCGTC GGTTCGACGG CAATCTCGAG GCTGCGGTGC GCTACGAGCT GGCCCCCAAG
GTCACCGGCG AGCTGCGCAG CCTGGAGGTG CGCATCGGTG ACACCCTCGA GCCCGGGGAT
CTGATCGCCC GGCTCGACGA CCAAGAGGTG GCGCAGGAGG TGGCCGAGGC CGAGGCGGGG
CTCGAGGTGG CCCGGGCGCA GCTTGCCGAG AGCCAGGCCG CCCTGGAGTC TGCTGAGCGG
GATCTGAATC GCACCCGCGA GCTTCGCGAG CGCCAGATCG CCTCGGCGGC GGAACTGGAG
GCCGCCGAGG CGCAAGTGGC CGCCGAGCGC AGCCGGGTGC AGCTGGCCCG GGCGCAGATT
GCGCAGCAGC AGGCGACGCT GAGCGCCGCG CAGATCCGCC GCTCCTTCAC CGAGATCCGC
GCCGACTGGG ACGAGGGCGA GCGGGTGGTC GGCGAGCGGT TCAAGGACCC CGGCGCTACG
GTCAGCGCTG GTGAGGCGAT GCTGACCTTG CTCGACATTT CCGAACTGCG AGCCGAGGCG
TTCGTTACCG AGCGAGAGTA CGCCCGTCTG ATGCCCGGGC AGTCGGCACG CTTGCGCGTC
GAGGGGTACC CGGACACCGA GTTCGAGGCC GAGGTGGCCC GGCTGGCCCC GCTTTTCAGC
GCCACCCTGC GCCAGGCCCG GGTCGAGTTC ACCGTGCCCA ACCCGGAGGG CCAACTGCGT
CCGGGGATGT TCGCCCGTCT GGCCGTGGAG GTTGGCCGGG CCGAGGATGT TCGCACCGTT
CCCCGCGAGG CGGTGGTGCA GCGTGGCGGA CAACCCTCGG TCTTCCTGCT TGAAGAGGGA
GAAGACGCCC CGCGGGTGCG CCTGATGCCG GTGGAGACCG GGCTGCGTGC CGAAGGGCGG
ATCGAGGTGC GCCCGCGTGA CGAGGAGGAC GGCGAGGCCC TCACGGGCCA CGTGGTGACC
CTGGGCCAGC ATCTGCTCGC CGATGGCAGC CGGGTCGAGG TGGTGGGAGA GCAGGCCGCC
GAGGTGGCCG CACCGTGA
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| Protein sequence | MPSRPRTRLQ TVLLWVASAL ILLGAVALFR ADLGTGPTGE GRETAAVAVE VDAVERRDLA
DVRRFDGNLE AAVRYELAPK VTGELRSLEV RIGDTLEPGD LIARLDDQEV AQEVAEAEAG
LEVARAQLAE SQAALESAER DLNRTRELRE RQIASAAELE AAEAQVAAER SRVQLARAQI
AQQQATLSAA QIRRSFTEIR ADWDEGERVV GERFKDPGAT VSAGEAMLTL LDISELRAEA
FVTEREYARL MPGQSARLRV EGYPDTEFEA EVARLAPLFS ATLRQARVEF TVPNPEGQLR
PGMFARLAVE VGRAEDVRTV PREAVVQRGG QPSVFLLEEG EDAPRVRLMP VETGLRAEGR
IEVRPRDEED GEALTGHVVT LGQHLLADGS RVEVVGEQAA EVAAP
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