| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1820 |
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| Symbol | |
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| ID | 4711043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1993704 |
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| End bp | 1995296 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639856290 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001003386 |
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| Protein GI | 121998599 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.175616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAG TGGACCTGGC CGGCAGCCTG AGCGCCGCAG ACATCGAGGC CATCGGTTAC
GGCCACAGGA CCGCAACGGT CTCGCCGACC GGCTGGAAGC GGCTGCGCTC GGCCGAGGCA
TACCTCCAGC GCCTGGTGGA TGAGCGCCGC CAGGTTTACG GCGTCACCAC CGGCTACGGC
CCCCTGGCCA CCAGCCGGAT CGACCCCTCG GCCTCACGCA CCCTGCAGCG CAACCTGGTC
TACCACCTGT GCAGCGGCGT CGGCGAGCCG CTCTCCCGCT GTCACACCCG GGCGACGCTT
GGCGCGCGGA TCGCCAGCGT CACCCGGGGC CACTCCGGGG TGACGCCAGC GGTGGTGGAG
CGGCTGCTGG CGTGGCTGGA ACACGACGTG GTGCCAGAGG TGCCGGCCAT CGGCACCGTC
GGCGCCAGCG GCGACCTGAC CCCGCTGGCC CATGTGGCCC GGGCCCTCAT GGGCGAAGGC
CGGGTGTGCA TCAACGGCGG GGAATGGGAG CCCGCCGACG CCGCCCAACG CCGCCTCGGC
TGGGAACCGT GGACCCTGGA CGGAAAGGAC GCCATCGCCC TGGTCAATGG CACCTCCACC
ACCGCGGGCA TATGCGCCGT GAACGGTGCA GGTGCTGAAC GTGCCGCCGG GGTCTGTGCG
GTGCTGGGGA TGGTTTACGC TGAGCTTCTC GGTGGCCATG CCGAGGCCTT CCAGCCGGCC
ATCGGAGCCG TCCGGCCCCA CCCCGGGCAG ATGCGCGCCC ACGCCTGGCT CACCGCTCTT
GCCGAGGACA GCCAGCGCCT CCAACCGTGG ACCGGCACAC CGCCCCGGCT GACCGAGGGC
CAGGAGGCCG TGCTTCCTGA TCAGCCCCTC CCCCAAGACC CCTACTCGAT TCGCTGTCTG
CCCCAGGCGC TGGGCGCGGT GCTGGACAGC ATCACCTTCC ACAACCAGAC CGTAGCCAGC
GAGCTAGACG CCGCCAGCGA CAACCCCCTG CTCTTCCCGG ACGAGGGGCG CGTGCTGCAC
GGCGGCAACT TCTTTGGCCA GCACCTTGCC TTCGCCGCCG ACGCCCTGAA CAATGCCGTG
GTGCAGCTGG CGTTACACAG CGAACGGCGC ATCAGCCGCA TCACCGACTC AACCCGCAGC
GGCTTTCCGG CCTTCATGCA GCCGCGCCAG ACCGGTTTGC ACAGCGGCTT CATGGGGGCC
CAGGTCACGG CCTCGGCCCT GGTGGCCGAG ATGCGGACCG GGGCCCACCC AGCCTCCATC
CAATCGATAC CGACCAACGC CGACAACCAG GACATCGTCC CCATGAGCAC CCGCGCAGCG
CGGCAGGCAG CCACCAACCT GGACCATCTG CAGCGGATCT TGGCCATCGA GGCGCTGGTG
CTGGCGCAAG GCCTCGAGCT GGCCGATGGT GTCGGGTTTA GCAGCAGCGC GCGGCGTACC
CTGGGATGGG TACGCGAACT GGCCCCACCG CTGGAGGACG ATCGCCCGCT GGCCGAGGAG
ATCGCCCGCG TTGCTGCTGC GCTGGCCACG CCGTACCAAG CCCACCGACT GGTTGCCGGG
CTTCCGGGCG CGCCCCCGGG GCCAGCCTCC TGA
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| Protein sequence | MAEVDLAGSL SAADIEAIGY GHRTATVSPT GWKRLRSAEA YLQRLVDERR QVYGVTTGYG
PLATSRIDPS ASRTLQRNLV YHLCSGVGEP LSRCHTRATL GARIASVTRG HSGVTPAVVE
RLLAWLEHDV VPEVPAIGTV GASGDLTPLA HVARALMGEG RVCINGGEWE PADAAQRRLG
WEPWTLDGKD AIALVNGTST TAGICAVNGA GAERAAGVCA VLGMVYAELL GGHAEAFQPA
IGAVRPHPGQ MRAHAWLTAL AEDSQRLQPW TGTPPRLTEG QEAVLPDQPL PQDPYSIRCL
PQALGAVLDS ITFHNQTVAS ELDAASDNPL LFPDEGRVLH GGNFFGQHLA FAADALNNAV
VQLALHSERR ISRITDSTRS GFPAFMQPRQ TGLHSGFMGA QVTASALVAE MRTGAHPASI
QSIPTNADNQ DIVPMSTRAA RQAATNLDHL QRILAIEALV LAQGLELADG VGFSSSARRT
LGWVRELAPP LEDDRPLAEE IARVAAALAT PYQAHRLVAG LPGAPPGPAS
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