| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1817 |
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| Symbol | |
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| ID | 4710964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1990709 |
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| End bp | 1991971 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639856287 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001003383 |
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| Protein GI | 121998596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.904553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG CTGTAGTCGG GGCCGGCGTC GTCGGAACCT CCGTGGCCTG GGAGCTGACC
GCCCGTGGCC ACCAGACCGT GCTGATCGAG CGCTGCAATG AGGTCGCACA GGAGACCAGC
TTTGCCAATG GCGCCCAGCT CCACGCCGGC CACGCCGCCC CGTGGAACCC GCCAGGCGTG
CTCCGCGACG CCATCGGCTG GCTCGGGAAA TCCGACTCGC CCCTGCGCAT CAACCCCCTG
CGGGTGCTGC GCAACCCCAG CTGGTCACTG CGTTTCCTGG CCAACGCCAC CGCGCGGCGC
TACCGGCGTC ACGCTGACGC CAACGCGGCG CTGGCCCTCT ACGGCGTACA GCAGGCACGC
GCCTGGCGCG ATGCCCTCGG ACTCACCTTC GATGCCCGCG ACAGCGGCAT CCTGAAGCTC
TTCGACGACC CCGACGCCCT GGAGCACGGA CGCGCCGAAG CGACCGCCGT GGAGGCTCTG
GGCATCCGCC ACCGGGTTCT GAGTATCGAC GAGACGCTCG CCCGCGAACC GGCTCTGAGC
GATGCCGCAG ATCAACTGGC CGGTGCCATC GAGTTCCCCG ACGACGGCTG TGGCGACCCA
CTGCAGTTCA CCGCAGCCCT CGCCGAGCGG CTGACCGCCG AGGGCGCCGA GCTCTGGCTG
GGCACTACGG CACGTCGACT GCTGGGCGGC CCTGCCGGGG TGGAGGGCGT CGAGACCAGC
CGCGGGGTCG TGGACGTCGA TGCCGTGGTC GTCGCAGCGG GCAGCTATAG CCCGGCCCTG
ACCCGCGCGT TCGGCGTGCG CCTGCCCATT GAACCGGTCA AGGGCTACTC GGTCAGCATC
CCGCTGAAGG GGGTCAAGGG CGCCCCGGAG ATGCCCATCA TCGACGACAC CCGCAAGGTG
GTGCTCACCC GGCTGGGTGA CCAGCTGCGC ATCGCCGGCA AGGCGGAGAT CACCGGCTTC
GACCTGAACC TGGACGAGCG GCGCTGGCAG GTCGTCCGCA AGCAGGGGCT GAGCCGCTTC
CCGCACCTGG CCGAGCAACT GGCGGACGCC CCGAGCCACC CCTGGGCCGG CCTGCGCCCG
ATGACCTGCG ACGGCCTGCC GATCCTCGGC CCAACACCGG TCTCCGGCCT CCATCTCGCC
ACCGGCGTGG GCCACCTGGG CTGGACGTTC GCCGCCGGCA GCGCACGCCT GGTTGCCGAC
CAGCTGGAGG AACGCACCTG CGATCTGGAC CCCACTCCTT ACCAACTGCG GAGACCCCGA
TAA
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| Protein sequence | MRIAVVGAGV VGTSVAWELT ARGHQTVLIE RCNEVAQETS FANGAQLHAG HAAPWNPPGV
LRDAIGWLGK SDSPLRINPL RVLRNPSWSL RFLANATARR YRRHADANAA LALYGVQQAR
AWRDALGLTF DARDSGILKL FDDPDALEHG RAEATAVEAL GIRHRVLSID ETLAREPALS
DAADQLAGAI EFPDDGCGDP LQFTAALAER LTAEGAELWL GTTARRLLGG PAGVEGVETS
RGVVDVDAVV VAAGSYSPAL TRAFGVRLPI EPVKGYSVSI PLKGVKGAPE MPIIDDTRKV
VLTRLGDQLR IAGKAEITGF DLNLDERRWQ VVRKQGLSRF PHLAEQLADA PSHPWAGLRP
MTCDGLPILG PTPVSGLHLA TGVGHLGWTF AAGSARLVAD QLEERTCDLD PTPYQLRRPR
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