Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1776 |
Symbol | |
ID | 4711005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1950714 |
End bp | 1951853 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639856246 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_001003342 |
Protein GI | 121998555 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0616181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCCGGC CAGCACTGCT CGTCCTCCAG GACGGTACGG TTTTCCACGG CGAGGCGGTG GGCGCCGACG GGGCCGTGAC CGGCGAGGTG GTTTTCAACA CCGCCATGAC CGGTTATCAG GAGATCGCCA CCGACCCTTC CTACGCCGGT CAGATCGTCA CTCTGACCTA TCCCCACATC GGCAATACCG GCATCAACAG TGTGGATCGC GAGGACGATC GCGCCCGGCT GGCTGGGCTG GTGGTGCGTG ATGTGCCGCC GCGGGCCAGC AACTGGCGTG CCGAGCAGGG ACTGACAGCG TGGTTGCGCG AGCAGGGGGT GGTGGCCATC TCCGGGATCG ATACTCGCAA ACTGACCCGC CGCCTCCGCG AAGGAGGCGC CCAGGGCGGC TGCCTGGCGG CCGGCGAGTC CCTGGACGAG GCGTGGGCAC TGGCTCAGGC GCAGGGGTAT GGCGGCATGA GCGGGCGCGA CCTGGCCGGA GAGGCCGGTA CCAAGACCCG CAGGCCCTGG CAGCGCGGGA CCTGGACCCT GGATGACGGG TGTGCGGACG CTGCCGAGCG TGGCGATGCC GGGCGCTACC ACGTGGTGGC CTTTGATTAC GGCATTAAAC AGCAGATCCT GCGCCTGCTC GTCGATGCCG ACTGCCGCGT CACCGTGGTG CCCGCGCGGA CCGCCGCCGC GGATGTCCTC AAGCTGGAGC CGGACGGCCT GTTCTTCTCC AACGGCCCGG GTGACCCGGA GCCCATGGAG TACGCCGTTG CCACCATCCG CGAGCTCCTC GACGAGCATC GCATCCCGAC CTTCGGCATC TGTCTGGGCC ATCAGCTGTT GGGGCTGGCC AGCGGGGCGC GGACCGAGAA GATGAAGTTC GGCCACCACG GGGCCAACCA CCCGGTGATC GATCTGGCCA CCGGCCAAGT GCTGATCTCC AGCCAGAATC ACGGCTTCGC CGTGGACGAG GCCAGCCTGC CGGCCCACCT GAAGGCGACT CACCGTTCGT TGTTCGACGG CTCGCTGCAG GGCATCCGTC GAACCGACGT GCCCGCCTTC AGCTTCCAGG GGCACCCGGA GGCGAGCCCG GGCCCCCACG ACATGCGGCC GCTGTTCCAG CGCTTCGTCG AGATGATGGA GCAGGGCTAA
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Protein sequence | MTRPALLVLQ DGTVFHGEAV GADGAVTGEV VFNTAMTGYQ EIATDPSYAG QIVTLTYPHI GNTGINSVDR EDDRARLAGL VVRDVPPRAS NWRAEQGLTA WLREQGVVAI SGIDTRKLTR RLREGGAQGG CLAAGESLDE AWALAQAQGY GGMSGRDLAG EAGTKTRRPW QRGTWTLDDG CADAAERGDA GRYHVVAFDY GIKQQILRLL VDADCRVTVV PARTAAADVL KLEPDGLFFS NGPGDPEPME YAVATIRELL DEHRIPTFGI CLGHQLLGLA SGARTEKMKF GHHGANHPVI DLATGQVLIS SQNHGFAVDE ASLPAHLKAT HRSLFDGSLQ GIRRTDVPAF SFQGHPEASP GPHDMRPLFQ RFVEMMEQG
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